Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1071 ATGGCGACTGAATCCACCGCCGCGAACGGTCCTCCCATTCCTTCGTCCAATTCCGCGGAATCCTTCATTGGTTGCTTCATAAGCTTGATTTCCAAGTGCGAGATTCGCTACGAAGGCGTTCTCTATTTGCTTAACATTCAGGATTCCACCATTGGCTTGAAGAACGTTAGATCCTTTGGAACTGAGGGGAGAAAAAAAGATGGTCCACAAGTTCTTCCAAGTGATAAGGTTTATGAATACATTCTTTTCCGAGGAAATGATATTAAGAATTTGCAGATTAAGTCACCCTCCACATCTTCCAAATCAGAAGAGCAAGTTTTTAGTGATCCAGCTATTATTCAGACTCAATATTCTACCGGGTTGCTAAGTTCCCCAGTGGGTGGGTTGCTAAGTTCTCCATTGTCCTCAGTTGGCGGTAGGAGTATGACAGAATCAATTCAAAGGCAAGATAGCCCTGCAATATCCAGTAAAGCTTTTCCTGCTGGGTTGCCTTCTCATCAGTCTGTAACTCAGCTGGGACCTTCAAATTCATCTGCTGCTACTCAAGTTGCTAGTCATCCATCTTTTTCTACAGCAATGTATTGGCAAGGACCCAGTGGGATATTTAACAGTAGTTCTCATTCTCTGCTACAATCTAGTTCTCTTCACCCTCCATCCCGGGCAGTATCCTTAGCTGTGCAGAATCAGATGCAAAATGCAGAAACTCAGATACCTATAAAAGGGGGGTGGACAGGTTTTTCAGAGTATGGTCTACCTGTTTCTTCTGCCATGACTTCTTCTCTTGTAAATCCGACTCATTCACCTTCTCTTACCTCTTTAAAAATTTCTGATTCTCTTGATATTCCATCCCTTTTGTCTGCTAAGAAACCTGTGCCATATTCTGCATCCATGACTTTTGATGGATCAAACATGCCCAAGTTTTCTTCACCGCTCCAAGACATAATATCTGGAAACAATGGTTCTGACCCAAGAGCAATTCATCCTCGACATTCTGTCCATCATTCTGCTTCTTCATTTGTAGATTCTACTTCACGTCCCTTGCCAACAACACCATCTTTGTTAACCCCAGGTCAATTTGCACATCCTAGAGAACAGTTGATGTCTATAACACATAATTTGAACCCTACTCAGAAGGATATGGGTTCTCTGACTCTAACATCCTCTGGTTCCTCTGCATTAATGCCTTTTCCAGCATCTCAGGCACCACTTCTTCCACTACCAACATCAGTGCAAAAGCCTCCATACACAGCTCCAGAATACACTGAAGAGTTTGATTTTGAAGCCATGAATGAAAAGTTCAAAAAAGATGAAGTGTGGGGTTCTCTTGGAAAGGCAACCACAAAAATAGAGGGAGTGGAGGATAATGCTTCTCTCAGTTTGGGTGACAGAGAACTTCATGGGGTGATACCAAATCCTAAGACTGCATACAAGAAAGATGACTTTTTTGACACAATTTCTTGCAACTCTTTGACTCGTGGATCAAGGAATGGACAAAATCGTTTCTCTGAGAGAATGAGACAGGATACTGAGACATTTGGCAATTTCCAGCAGAGGCCTAATTTTGGTTATGGTGGTGGACGGGGTGCGAATATCAGGGGCTCACATAATTGGGGAAGAGGGGGTTATGGCTACAATGGGAGAGGGCGTGGTCCAAACTTTCCTCCTTTCTAG 1671 0.4321 MATESTAANGPPIPSSNSAESFIGCFISLISKCEIRYEGVLYLLNIQDSTIGLKNVRSFGTEGRKKDGPQVLPSDKVYEYILFRGNDIKNLQIKSPSTSSKSEEQVFSDPAIIQTQYSTGLLSSPVGGLLSSPLSSVGGRSMTESIQRQDSPAISSKAFPAGLPSHQSVTQLGPSNSSAATQVASHPSFSTAMYWQGPSGIFNSSSHSLLQSSSLHPPSRAVSLAVQNQMQNAETQIPIKGGWTGFSEYGLPVSSAMTSSLVNPTHSPSLTSLKISDSLDIPSLLSAKKPVPYSASMTFDGSNMPKFSSPLQDIISGNNGSDPRAIHPRHSVHHSASSFVDSTSRPLPTTPSLLTPGQFAHPREQLMSITHNLNPTQKDMGSLTLTSSGSSALMPFPASQAPLLPLPTSVQKPPYTAPEYTEEFDFEAMNEKFKKDEVWGSLGKATTKIEGVEDNASLSLGDRELHGVIPNPKTAYKKDDFFDTISCNSLTRGSRNGQNRFSERMRQDTETFGNFQQRPNFGYGGGRGANIRGSHNWGRGGYGYNGRGRGPNFPPF 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1071 556 ProSiteProfiles TFG box profile. 496 516 IPR025768 -
Aed11g1071 556 PANTHER SCD6 PROTEIN-RELATED 17 549 - -
Aed11g1071 556 ProSiteProfiles FFD box profile. 474 489 IPR025761 -
Aed11g1071 556 MobiDBLite consensus disorder prediction 318 357 - -
Aed11g1071 556 Gene3D - 13 98 - -
Aed11g1071 556 SMART LSM14_2 16 117 IPR025609 -
Aed11g1071 556 ProSiteProfiles DFDF domain profile. 412 448 IPR025762 -
Aed11g1071 556 Pfam FDF domain 420 514 IPR019050 -
Aed11g1071 556 SMART FDF_2 418 516 IPR019050 -
Aed11g1071 556 CDD LSm14_N 19 93 IPR025609 -
Aed11g1071 556 MobiDBLite consensus disorder prediction 537 556 - -
Aed11g1071 556 MobiDBLite consensus disorder prediction 335 356 - -
Aed11g1071 556 Pfam Scd6-like Sm domain 22 95 IPR025609 -
Aed11g1071 556 SUPERFAMILY Sm-like ribonucleoproteins 21 96 IPR010920 -
Aed11g1071 556 PANTHER DECAPPING 5-LIKE PROTEIN-RELATED 17 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1071 Aed-Chr11 16383208 16388292 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1071 K18749 - gmx:102669894 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1071 11 16383208 16388292 Aed11g1071 11 16383208 16388292 ECH