Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1058 ATGGGTTTGCCACGGTTTGGGCGTGCAAAGAATGACGGTGAATTGAGTCCGAACCTTTACGTGGCAAATTGTGGAAGCGCAGTGGGACTCTCTGATGATGACATTGCATCTGTGTTCTGCAAATTTGGAGAGCTGAAGGGAGTTTATGCAGCAGATGAGAGTGGGACACGTGTCATTGTGGCTTATGCTGAAGAGGCTTCTGCACAAGCTGCCTTAGAGGCATTACATGGACAACCATGTCCTCAACTTGGAGGTCGATCCTTGCATATCCGTTATTCTGTGCTTCAGCCAATTCCACAGGATCAAGGTAGTAGTGACTTGGTTCCTGTATCTATAACAGCATCAGATGTGAGCATTCCAGGCCTTTACCTAGTGCATGACTTCATTAGTGCTAAAGAAGAAGAGGAGTTGCTTCAAGCTGTTGACTGTAGGCCTTGGAACAGTCTTTCAAAAAGAAGGGTTCAACACTATGGTTATGAGTTTCGTTATGATATTAGGAATGTTAATACAAGACATTGCTTAGGTGAACTTCCATCATTTGTTTCTCCAATACTTGAAAGAATCTCATCATGTCCAACTTTCAAGAATGTTAAAAATATAGTTTTGGACCAACTTACGGTAAATGAGTACCCACCTGGAGTGGGCTTGTCCCCCCATATAGACACTCACTCTGCATTTGAAGATTTAATTTTCAGCCTGTCATTATCAGGGCCTTGTATAATGGAGTTCAGACAATATGAAAATGGTGATTGGCTTCCCAGAGTTGCCTCAAGTGCTGTTGCAAACATAGAAAATCCAGAAGATCATTCAAAGTTTATAAGGAGAGTTATCTATCTTCCCCCTCGATCTTTGCTACTCTTGTCTGGAGAAGCACGCTATGCATGGCATCATTACATTCCACATCACAAGATTGACAAAGTGAATGGCAAAATCATCAGAAGGGCTTCGAGAAGGGTATCTTTTACACTTCGTAAGGTTAGAGAAGGTTTGTGCAAATGTGAATTTCCTCAGTATTGCAATTGA 1023 0.4213 MGLPRFGRAKNDGELSPNLYVANCGSAVGLSDDDIASVFCKFGELKGVYAADESGTRVIVAYAEEASAQAALEALHGQPCPQLGGRSLHIRYSVLQPIPQDQGSSDLVPVSITASDVSIPGLYLVHDFISAKEEEELLQAVDCRPWNSLSKRRVQHYGYEFRYDIRNVNTRHCLGELPSFVSPILERISSCPTFKNVKNIVLDQLTVNEYPPGVGLSPHIDTHSAFEDLIFSLSLSGPCIMEFRQYENGDWLPRVASSAVANIENPEDHSKFIRRVIYLPPRSLLLLSGEARYAWHHYIPHHKIDKVNGKIIRRASRRVSFTLRKVREGLCKCEFPQYCN 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1058 340 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 17 95 IPR000504 GO:0003723
Aed11g1058 340 SUPERFAMILY Clavaminate synthase-like 119 327 - -
Aed11g1058 340 PANTHER ALKYLATED DNA REPAIR PROTEIN ALKBH8 HOMOLOG 15 339 - -
Aed11g1058 340 Gene3D - 113 332 IPR037151 -
Aed11g1058 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 201 327 IPR005123 -
Aed11g1058 340 SMART rrm1_1 18 91 IPR000504 GO:0003723
Aed11g1058 340 SUPERFAMILY RNA-binding domain, RBD 13 101 IPR035979 GO:0003676
Aed11g1058 340 Gene3D - 7 107 IPR012677 -
Aed11g1058 340 Pfam 2OG-Fe(II) oxygenase superfamily 157 324 IPR027450 -
Aed11g1058 340 PANTHER UNCHARACTERIZED 15 339 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1058 K10770 - gmx:100777529 643.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1058 11 16291827 16296310 Aed11g1058 11 16291827 16296310 ECH