Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1047 ATGGATGCTATAAGGAAGCAAGCAAGCAAATTGAGGGAGCAAGTTGCCAGGCAACAGCAGGCTATACTTAGACAGTTGGGCCAAATTAGTAATGAACCGCTCATGTCTGATGAATCTGAAATTGAATGTCACCAGCAACTTCAAAAGTTATACACTTCTACAAAGACAGCTAAGCATTTTCAGCGGCATGTTGTTCGGGCTATTGAAGGATTCATTTCTGTTAGCTCCAAGCAGATGGAGATAGGTGAATTTGGCTTTTTGCACCTTTGTTGTTTTGTTTTATGCCTTGAGGTTGATAATTCATATTTTGTTCTCTATAAATCAGTGAGGAGAATGGCTAGGAACTGCTGTAAGTATGGGACTGAGAATCTAGGTAGTAGTTACTCCCTTGCAAGGGCTTCTCTTCAATTTGGTAACACATATGATATAATGGAAAATGAGAAGGAAACTTTGCTTGGGATCTTAGGCGATCAGATCTCTGAGCCACTGCGGACACAGATAACAGGAGCTCCTTTGGAGGATGCACGTCACCTCACTCACCGCTATGACAAACTTCATCAAGAGGTAGAAGCCCAGATATCTTCTCATCAGGCTGCTGAAGTTTTGAGGCGTCGATCAAAGTTGAGGAATTCTTCTGTTTCTGCAGAGAGTTCTGCGAGGCTTCAAAATGCAGAAACAAGGTTGAAAGAACTTAAATCTGCCTTGGCGGCACTTGGTAGAGAAGCAACTGCTGCTATGTTGTCTGTTGAAGAACAACAGCAACAGATGACTCTCCAGAGCCTTCGTACAATGGTGGATGCTGAGAGATCCTATCATCACCATGTCCTTGTTATTCTAGAGAAACTATATACTGAGGTCGTACATCCATTTGATGCTCAAGCTGAGGGGGAGTTAAGCCTATCAGTTGATGATTTTGTTGTAGTTCGTCAGGTTGGTCCCAATGGATGGTCTGAAGGAGAATTGAAAGGCAATGCTGGATGGTTTCCCTCTGCTTATGTACAGCGACAGGACATGATACCAGCCAGCAAGATAACAGAATAA 1041 0.4304 MDAIRKQASKLREQVARQQQAILRQLGQISNEPLMSDESEIECHQQLQKLYTSTKTAKHFQRHVVRAIEGFISVSSKQMEIGEFGFLHLCCFVLCLEVDNSYFVLYKSVRRMARNCCKYGTENLGSSYSLARASLQFGNTYDIMENEKETLLGILGDQISEPLRTQITGAPLEDARHLTHRYDKLHQEVEAQISSHQAAEVLRRRSKLRNSSVSAESSARLQNAETRLKELKSALAALGREATAAMLSVEEQQQQMTLQSLRTMVDAERSYHHHVLVILEKLYTEVVHPFDAQAEGELSLSVDDFVVVRQVGPNGWSEGELKGNAGWFPSAYVQRQDMIPASKITE 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1047 346 Pfam Variant SH3 domain 286 334 IPR001452 GO:0005515
Aed11g1047 346 ProSiteProfiles Src homology 3 (SH3) domain profile. 279 338 IPR001452 GO:0005515
Aed11g1047 346 SUPERFAMILY BAR/IMD domain-like 42 285 IPR027267 -
Aed11g1047 346 Gene3D Arfaptin homology (AH) domain/BAR domain 41 284 IPR027267 -
Aed11g1047 346 Coils Coil 1 21 - -
Aed11g1047 346 SUPERFAMILY SH3-domain 279 338 IPR036028 GO:0005515
Aed11g1047 346 PANTHER SH3 DOMAIN-CONTAINING 286 346 - -
Aed11g1047 346 PANTHER SH3 DOMAIN-CONTAINING 1 285 - -
Aed11g1047 346 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 286 346 - -
Aed11g1047 346 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 1 1 285 - -
Aed11g1047 346 Coils Coil 214 241 - -
Aed11g1047 346 Gene3D SH3 Domains 285 336 - -
Aed11g1047 346 SMART SH3_2 282 337 IPR001452 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1047 Aed-Chr11 16237170 16241684 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1047 - - gmx:100816554 538.495
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1047 11 16237170 16241684 Aed11g1047 11 16237170 16241684 ECH