Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed11g1044 | ATGACGCGGGGAAAACAGAAGATCGAAGCGCAGAAGCGGAATTCAGAGAAGAATCAGAAGTCAAAGGGCTCTCAGATCGAGGCCAGAGCCGTTGGCCTCAAAGTCACCTGCCCCATCTGCAAGGCCCAACTTGCAAATCAAAACCAACTTATTGATCATTTTTCCTCCAAACATCCGAAGGAGAAACCCCCTTCAGATTCAAGCTAG | 207 | 0.4879 | MTRGKQKIEAQKRNSEKNQKSKGSQIEARAVGLKVTCPICKAQLANQNQLIDHFSSKHPKEKPPSDSS | 68 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed11g1044 | 68 | Pfam | Zinc-finger of C2H2 type | 36 | 57 | - | - | |
| Aed11g1044 | 68 | Gene3D | - | 1 | 66 | IPR026939 | - | |
| Aed11g1044 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | - | - | |
| Aed11g1044 | 68 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 35 | 63 | IPR013087 | - | |
| Aed11g1044 | 68 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Aed11g1044 | 68 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 37 | 58 | IPR013087 | - | |
| Aed11g1044 | 68 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Aed11g1044 | 68 | PANTHER | GEO09665P1-RELATED | 1 | 66 | IPR045230 | - | |
| Aed11g1044 | 68 | SUPERFAMILY | Expressed protein At2g23090/F21P24.15 | 1 | 64 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed11g1044 | - | - | gmx:100500226 | 127.102 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Aed11g1044 | 11 | 16217823 | 16221865 | Aed11g1044 | 11 | 16217823 | 16221865 | ECH |