Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1041 ATGCTCGAGGAACAGCCTGTTGTTTTGCTCAGGAAGAGCCCTTCCCGGAGGCGCCTGAGATCTGGCTTTGATACTGATGATAGGGGTTGGACCTCGCTTCATGTTTTCGCGAGAAAAGGCGATCTCAAATTGGTTAAAAAACTTCTCAATGAAGGAATGGACGTCAATGTGTCTGCATGGGGCCCCAAATCTAAAGGGGTGACCCCTCTCCACCTTGCTGCCGAAGGTGGTCACATTGGAGTGATGGATGTACTACTTGAGCGTGGGACACCGCTCCATATTGCAGCCAAAGAAAGGAGGAGGGATGCCGTGAAATTCTTGGTAGAGAATGGAGCCTTCTTGCCACCTGATATCACTGATAGCAGATTTAACCCTCCTCTTCATTACTGCCATGGACTAGAATGGGCCTATGAGGAGATGAAGCGACTTCGACTTCAACAGGAAGACTCGTCTGCTGGAGAGACATCTTACAGTTCTGAAAATTGA 486 0.4897 MLEEQPVVLLRKSPSRRRLRSGFDTDDRGWTSLHVFARKGDLKLVKKLLNEGMDVNVSAWGPKSKGVTPLHLAAEGGHIGVMDVLLERGTPLHIAAKERRRDAVKFLVENGAFLPPDITDSRFNPPLHYCHGLEWAYEEMKRLRLQQEDSSAGETSYSSEN 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1041 161 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 9 160 - -
Aed11g1041 161 ProSiteProfiles Ankyrin repeat profile. 28 60 IPR002110 GO:0005515
Aed11g1041 161 Pfam Ankyrin repeats (3 copies) 21 89 IPR002110 GO:0005515
Aed11g1041 161 SMART ANK_2a 65 94 IPR002110 GO:0005515
Aed11g1041 161 SMART ANK_2a 28 57 IPR002110 GO:0005515
Aed11g1041 161 ProSiteProfiles Ankyrin repeat region circular profile. 28 57 - -
Aed11g1041 161 PANTHER ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 1-LIKE 9 160 - -
Aed11g1041 161 SUPERFAMILY Ankyrin repeat 25 131 IPR036770 -
Aed11g1041 161 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Aed11g1041 161 Gene3D - 15 89 IPR036770 -
Aed11g1041 161 Gene3D - 90 155 IPR036770 -
Aed11g1041 161 ProSiteProfiles Ankyrin repeat region circular profile. 65 89 - -
Aed11g1041 161 ProSiteProfiles Ankyrin repeat region circular profile. 87 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1041 32 142 Acyl Lipid Metabolism Gene Families AT5G53470 31.148 2.66e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1041 - - gmx:100818162 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1041 11 16212798 16216074 Aed11g1041 11 16212798 16216074 ECH