Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1010 ATGGGTTCCGAAGTAATAGTAGTAGAAGAAACAGCACCGGAAACGACATCGTTGAATTCTCCCAAAAAAATTCAAAACGACGCTCCCACCGAAAACTGTCACGTGTCTGTTACTCCCACTCCCACCACGCTCTCACTCGTGCAGCCGCATTCGCTTCTCCCGAAACCAGTACCTCCAACAACGGTTTCTCCCCGAAACGACGTCGTCGTTTCGGCCTTCGGGAAGTTCCTCCGCAAGCGCAGCAACGACCTGTCGTCCGCGATCAGCAAGGGGATCTCCACGCTGAAGCACTCGATCAACGACCAAAACGACGACGTCGACGGCGTGACGGAGTTCAACCTGTCCGGACTGAAGGTCTTCGTGACGGTGAAAAACAAAAACGACGACGCCTCAGCGTCGTCGTTTTCGCGGCGGGGGCGAATCAGCTTCTTCTCGCGCTCGAACTGCAGAGAGTGTTGCGCGGTGAGAGGGTTCTTCAGAGAGAGAGGATTGAAGTTCGTTGAGATAAACGTCGACGTGTTCGCGGAGCGAGAGAAGGAGCTGAGAGAGAGAACCGGGAGCGCCACGGTGCCGCAGATCTTCTTCGGCGAGAGGCTGATCGGAGGCTTGGTGGAGCTGAACGCGCTGAGGAAGGACGGTTGTGAGGAGTTGGAGAAGCGGCTGAAGGTGACGGCATCCGGCGGCGAGGGGACCGCCGGCGCCGGCGTACGGGCGGAGGAGGAGGAGGTGGAGGAGGCGGAGGAGATGGAGATTGGGAAGGTGGTTAGGGTTTTGAGGCAGAGGTTGCCGATTCAGGATCGCTTGATGAAGATGAAGATTGCGAGGAACTGCTTCGCGGGGAGTGAATTGGTGGAGCTTCTCGTTCGACACCATGGCTATGCTCCTTCCAAGGCTGTTGAGATTGGGAAACAGTTATGCAAGAAGCACTTCATCCATCATGTTTTCGGGGAAAATGATTTTGAGGAAGGAAACCACTTCTATAGATTCCTTGAGCACGAACCTTGTATCTCCAAATGCTTTAACTTCCGTGGTACCACAAATGATAGTGAACCGAAGGCTGCAGCTGCAGTATGTGATAGGCTTACCAAGATTATGTGTGCCATTCTTGAGTCTTATGCTTCTGAAGACAGGAGACATTATGAGTATGAAATACTACAGCAAAACTTGTATGTAAACATGACCCAGGATCTTCAGCGGGTGAATCTCTTGGAACTATCAGAAAACGAGACGCTTGCTTTCTTCATAAATTTGTACAATGCCATGATCATCCATGCTATCATCATAGTAGGGTGTCAAGAAGGTGTAATTAATAGGAGATCCTTCTCTGACTTCCACTATTTGATTGGAGGGCATCCTTATTCTCTTAGTGCTATTAAAAATGGTATCCTCAGAAGCAATCGGAGAGTTGCAGAAGAATTGAGAAGTGCTGCTAGAGAGTATTTTAAGAATGATGGAATTGAAGTGGACTTGGAGGCGAGAACCATCCGCCTCACTCCAATTTTTAAGTACTCTGCGGATTTCGGACAAGAGAGAAACATACTGAAGTGGATAATAAGTTTCTTGGATGCAAATAAAGCAGGTCTTTTGACACATCTCTTAGGTGATGGTGGTGGCCATGTTAACATCTCTTACATGAGTTATGACTGGTCAATAAATTCCTGA 1662 0.4946 MGSEVIVVEETAPETTSLNSPKKIQNDAPTENCHVSVTPTPTTLSLVQPHSLLPKPVPPTTVSPRNDVVVSAFGKFLRKRSNDLSSAISKGISTLKHSINDQNDDVDGVTEFNLSGLKVFVTVKNKNDDASASSFSRRGRISFFSRSNCRECCAVRGFFRERGLKFVEINVDVFAEREKELRERTGSATVPQIFFGERLIGGLVELNALRKDGCEELEKRLKVTASGGEGTAGAGVRAEEEEVEEAEEMEIGKVVRVLRQRLPIQDRLMKMKIARNCFAGSELVELLVRHHGYAPSKAVEIGKQLCKKHFIHHVFGENDFEEGNHFYRFLEHEPCISKCFNFRGTTNDSEPKAAAAVCDRLTKIMCAILESYASEDRRHYEYEILQQNLYVNMTQDLQRVNLLELSENETLAFFINLYNAMIIHAIIIVGCQEGVINRRSFSDFHYLIGGHPYSLSAIKNGILRSNRRVAEELRSAAREYFKNDGIEVDLEARTIRLTPIFKYSADFGQERNILKWIISFLDANKAGLLTHLLGDGGGHVNISYMSYDWSINS 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1010 553 Pfam Glutaredoxin 143 200 IPR002109 -
Aed11g1010 553 Pfam Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP) 262 329 IPR000591 GO:0035556
Aed11g1010 553 Gene3D - 246 390 IPR036388 -
Aed11g1010 553 ProSiteProfiles DEP domain profile. 258 331 IPR000591 GO:0035556
Aed11g1010 553 CDD DEP 255 328 - -
Aed11g1010 553 Gene3D Glutaredoxin 137 224 - -
Aed11g1010 553 ProSiteProfiles Glutaredoxin domain profile. 129 228 - -
Aed11g1010 553 SUPERFAMILY Thioredoxin-like 137 213 IPR036249 -
Aed11g1010 553 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 467 553 - -
Aed11g1010 553 PANTHER ELECTRON CARRIER/ PROTEIN DISULFIDE OXIDOREDUCTASE 8 468 - -
Aed11g1010 553 SUPERFAMILY "Winged helix" DNA-binding domain 253 348 IPR036390 -
Aed11g1010 553 SMART DEP_3 258 331 IPR000591 GO:0035556
Aed11g1010 553 PANTHER DISHEVELLED/EGL-10/LECKSTRIN DOMAIN PROTEIN 8 468 - -
Aed11g1010 553 PANTHER DISHEVELLED/EGL-10/LECKSTRIN DOMAIN PROTEIN 467 553 - -
Aed11g1010 553 Pfam Protein of unknown function, DUF547 404 473 IPR006869 -
Aed11g1010 553 MobiDBLite consensus disorder prediction 10 29 - -
Aed11g1010 553 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1010 Aed-Chr11 15941831 15945932 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1010 - - gmx:100784667 839.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1010 11 15941831 15945932 Aed11g1010 11 15941831 15945932 ECH