Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0558 ATGGAGAGAAGAAGAAGGGATGTGACTCTCTTTTGTTTAGTTTTGTTCTTCTTGTGGACTTCAGTGACTGCTTTGCTTTCTCCTAAAGGTGTCAACTATGAAGTTCAAGCTCTGATGGGAATCAAGAACTCTCTGGTGGATCCTCATTCTGTCTTGAATAACTGGGATAATGATGCTGTGGATCCTTGCAACTGGCCTATGGTCACTTGCTCTAATGATCATTTTGTAATTGCCCTTGGAATTCCAAGCCAAAGTATATCTGGTACTCTCTCACCAAGCATAGGAAACTTAACAAACCTTCAGACTGTGCTTCTGCAGGATAATAATATAACAGGACCAATCCCCTCTGAGATTGGAAGGCTACAAAAGCTTCAAACTCTTGATCTTTCTGACAATTTCTTCACTGGTCAACTTCCAGATTCTCTTTCCCACATGAAAGGTCTCCACTATTTGCGGCTAAACAATAACAGTATCACTGGACCAATTCCTTCATCTTTGGCTAACATGACTCAGCTTGCCTTTCTGGATATCTCTTATAATAACTTGAGTGAACCTGTGCCAAGAATAAATGCAAAAACATTCAATATTGTAGGCAATCCTCAAATATGTGCCACTGGAGTTGAGAAGAACTGCTTCAGAACAACATCAATAATTCCTTCTGCTTTGAATAATTCTCAAAATTCACAATCCACCAAAAGACAAAAAAGTCACAAATTTGCCTTGGCGTTTGCTTCAAGCTTAAGCTGCATATGCTTACTAATTCTTGGACTTGGCTTCCTCGTCTGGTGGAGACAAAGATATAACAAGCAAATATTTTTTGATGTGAAGAAAATCCACCAAGAGAAGAAAATAGATTTGTTGGTTGACAAGGACTTGAAAAACAACTATGATAGGATTGAGCTTGATGAAATAGTTCAAGTGGCTCTTCTATGCACTCAGTACCTTCCAAGCCACAGACCAAAGATGTCTGAAGTAGTTAGAATGCTTGAAGGAGATGGCCTTGCAGAGAAATGGGAGGCCTCACAGAGAGCTGAGTCCACAAGAAGTAGAGGCAATGAACTCTCCTCTTCAGAGCGCTACTCCGATCTCACCGACGACTCTTCGTTACTTGCACAAGCAATGGAGCTTTCTGGACCAAGATGA 1143 0.4068 MERRRRDVTLFCLVLFFLWTSVTALLSPKGVNYEVQALMGIKNSLVDPHSVLNNWDNDAVDPCNWPMVTCSNDHFVIALGIPSQSISGTLSPSIGNLTNLQTVLLQDNNITGPIPSEIGRLQKLQTLDLSDNFFTGQLPDSLSHMKGLHYLRLNNNSITGPIPSSLANMTQLAFLDISYNNLSEPVPRINAKTFNIVGNPQICATGVEKNCFRTTSIIPSALNNSQNSQSTKRQKSHKFALAFASSLSCICLLILGLGFLVWWRQRYNKQIFFDVKKIHQEKKIDLLVDKDLKNNYDRIELDEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSRGNELSSSERYSDLTDDSSLLAQAMELSGPR 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0558 380 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Aed11g0558 380 MobiDBLite consensus disorder prediction 347 368 - -
Aed11g0558 380 SUPERFAMILY L domain-like 33 196 - -
Aed11g0558 380 SUPERFAMILY Protein kinase-like (PK-like) 250 333 IPR011009 -
Aed11g0558 380 MobiDBLite consensus disorder prediction 337 368 - -
Aed11g0558 380 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 276 - -
Aed11g0558 380 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 275 380 - -
Aed11g0558 380 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 276 - -
Aed11g0558 380 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Aed11g0558 380 Gene3D Transferase(Phosphotransferase) domain 1 246 349 - -
Aed11g0558 380 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 275 380 - -
Aed11g0558 380 Gene3D Ribonuclease Inhibitor 31 213 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0558 Aed-Chr11 5197404 5202901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0558 217 380 Receptor kinase-like Gene Family AT5G16000 58.480 9.40e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0558 - - gmx:100804283 489.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0558 11 5197404 5202901 Aed11g0558 11 5197404 5202901 ECH