Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0411 ATGAAGGGAGAATGGTTGGAATTGGAATTGGAGAAGGAAATTGGAGACGCCATTTCCCGAACCCAATTCGCGCCTCACTCTAACAACCTCCTCATCTCTTCTTGGGACTCCAATCTCCGCCTCTACGACGTCTACGCCTCCCTCCTCAGACTCCAAGCTCCTTCGCAAGCTCCGCTTCTCGATTGCTGCTTCCAGGACGACGTCGTTGCCTTCTCCGCCGCCTCCGACGGATTAATCAGCAGGTATGACTTGCATTCGGGACTTGTTGATTCAGTGGGTAGTCACGATGATATGGCAACTGCAGGTCAGTTGGTCACATCCGGATTTGACAAAAAGTTACTGTTATGGGACATGCATACGAAGAAGACTTCTTTATGTTTGAGAAGTCTAGATGCAGAGGTGGAGTCCATGTCTGTCTCTGGGTTTAATGTTAATGTAGCCATTGGAGCATCAGTGCATGTTTATGATTTACGTAACTTTGACCAACCAGTTGAGTCGATAGAGGCATTCAATGGAACACACTTAAGATGTGTCAGTTCAATTCCAGATGCAGAAGGATTTGCAGTTGGGTCTGTAGATGGACGAGTATCACTGCAGATTTCCTATCCATCCAGTTCAAACAACATTAGTGTATCTGGTGCTTTTGCCACTGGTGACAATGAAGGTTATGTTACCATATGGGATGCTGGATGTAAGAGGAGACTAGTTGAGTTGCCCAGGTACCCAAATAGTGTTGCATCTTTATCATACAACCACACGGGACAGCTTCTTGCTGTAGCATCAAGCCATACTTACCAAGAAGCAAATGAAATCCTTTATTCTATTAATCTGATTATTGCATCTTTGCTACTGATAGAGAAAAACCACCTCGAATATTCATCCATAGAGTGGACAGCATTGATATGGGATCAATTTCTGCCAGTAAGAAAAGTTAAAGCATTTATGCTATGCTTGTCAACGAAGAGATCAAATGAGGAAGTGAGATTTAGTCTAGGATCTTTGACTGAATGGTTTTTGCCATAA 1023 0.4379 MKGEWLELELEKEIGDAISRTQFAPHSNNLLISSWDSNLRLYDVYASLLRLQAPSQAPLLDCCFQDDVVAFSAASDGLISRYDLHSGLVDSVGSHDDMATAGQLVTSGFDKKLLLWDMHTKKTSLCLRSLDAEVESMSVSGFNVNVAIGASVHVYDLRNFDQPVESIEAFNGTHLRCVSSIPDAEGFAVGSVDGRVSLQISYPSSSNNISVSGAFATGDNEGYVTIWDAGCKRRLVELPRYPNSVASLSYNHTGQLLAVASSHTYQEANEILYSINLIIASLLLIEKNHLEYSSIEWTALIWDQFLPVRKVKAFMLCLSTKRSNEEVRFSLGSLTEWFLP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0411 340 SMART WD40_4 160 228 IPR001680 GO:0005515
Aed11g0411 340 SMART WD40_4 7 43 IPR001680 GO:0005515
Aed11g0411 340 SMART WD40_4 75 117 IPR001680 GO:0005515
Aed11g0411 340 PANTHER MRNA EXPORT FACTOR AND BUB3 210 275 - -
Aed11g0411 340 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 210 275 - -
Aed11g0411 340 SUPERFAMILY WD40 repeat-like 15 262 IPR036322 GO:0005515
Aed11g0411 340 ProSitePatterns Trp-Asp (WD) repeats signature. 104 118 IPR019775 -
Aed11g0411 340 PANTHER MRNA EXPORT FACTOR AND BUB3 7 209 - -
Aed11g0411 340 PANTHER MITOTIC CHECKPOINT PROTEIN BUB3.3 7 209 - -
Aed11g0411 340 Gene3D - 3 275 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0411 Aed-Chr11 3522166 3526477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0411 K02180 - gmx:112997601 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0411 11 3522166 3526477 Aed11g0411 11 3522166 3526477 ECH