Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0345 ATGGGCACTACACTTATGAGATGCTCCCATGGCAACGCTCTCTTCAGAGCTCTCAATCTCAAACCCCGCCATTCTTCACTGCCACTTTCTTCAATTCCCATGAACAAAAGTAATGATGGGAAGGCATATGATGCATTGTTGTTGGATGCTGGGGGCACCCTTTTGCAATTGGCAAAGCCAGTTGAGGAGACTTATGCTGCTATTGGATCCAAATATGGTGTGACTGTGGATTCAGCTATGATAAAGCAAGGATTTAAGAGAGCATTTGCTGCTCCATGGCCTGAAAAGCTACGATACCAGGGAGATGGGAGGCCATTTTGGAAACTTGTAGTGTCTGAAGCCACTGGTTGTGGAGATGAAGATTATTTTGAGGAAGTTTATGAGTACTATGCAAAAGGTGATGCATGGCATCTTCCAGATGGAGCTCATGAAACCATTACTTTTCTCAAGGATGCTGGAGTTAAGATGGCTGTTGTATCCAATTTTGACAACCGCTTAAGGAAGCTATTGAAGGATCTTAAGGTTTTAAATCTGTTTGATGCTGTCATTATATCATCAGAGGTTGGATATGAAAAACCAGATCCAAGAATATTCCAAGCTGCTCTTGATCAAGTAAATGTAGAGGCTTGCAAAGCCTTACACATTGGAGATGATCACAAGGCAGATAAACTGGGGGCCAATGCTGTAGGGATTGATTGCTGGTTATGGGGTATAGATGTGAAGACATTCTCTGATATACAAATCCGCATTCTGAATTCAGAGGCATAA 768 0.4245 MGTTLMRCSHGNALFRALNLKPRHSSLPLSSIPMNKSNDGKAYDALLLDAGGTLLQLAKPVEETYAAIGSKYGVTVDSAMIKQGFKRAFAAPWPEKLRYQGDGRPFWKLVVSEATGCGDEDYFEEVYEYYAKGDAWHLPDGAHETITFLKDAGVKMAVVSNFDNRLRKLLKDLKVLNLFDAVIISSEVGYEKPDPRIFQAALDQVNVEACKALHIGDDHKADKLGANAVGIDCWLWGIDVKTFSDIQIRILNSEA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0345 255 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 46 235 IPR011949 -
Aed11g0345 255 Gene3D - 59 131 IPR044924 -
Aed11g0345 255 SUPERFAMILY HAD-like 43 236 IPR036412 -
Aed11g0345 255 PANTHER - 1 254 - -
Aed11g0345 255 CDD HAD_dREG-2_like 142 252 - -
Aed11g0345 255 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 147 230 IPR006439 -
Aed11g0345 255 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 43 235 - -
Aed11g0345 255 SFLD Haloacid Dehalogenase 43 235 - -
Aed11g0345 255 Gene3D - 47 235 IPR023214 -
Aed11g0345 255 Pfam Haloacid dehalogenase-like hydrolase 120 233 IPR041492 -
Aed11g0345 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 149 162 IPR006439 -
Aed11g0345 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 43 54 IPR006439 -
Aed11g0345 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 179 195 IPR006439 -
Aed11g0345 255 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 197 217 IPR006439 -
Aed11g0345 255 PANTHER F14L17.7 PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0345 Aed-Chr11 2863983 2867538 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0345 - - gmx:100306694 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0345 11 2863983 2867538 Aed11g0345 11 2863983 2867538 ECH