Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0344 ATGGTTCTTCTCAAATGTGGCGAGAAGCTATACTCAGGACTGGTTACCACCATGACTGTTCATATCAAAGAGATTGTGAGATCCATCGAAGCCATGCACGGAGTTTCCTTTCTGGGAGAAATGAACAGGAAATGGAATGATCATAACATGGTATTACCATTGATTAGATGCATTCTTCTGTACATGGATAGGTGTTACATTCCAAAAACCAGGGAAACCCCTATTCATGAACTTAGCATGAACCTGTGGAGAGAAAATGTTATATACTTAAACCAGATAAGGACCAGACTGTTGAATACACTTTTGGAATTGGTGCGCAGTGAATGTGCAGGCGAAGCAGTTATTAACAAAGGACTGTTTAGAAATATAACAAAGATGCTAATGGATTTAGGTCCTGCTGTTTATGAGAAAGAATTTGAGACTCATTTTCTTCAAGTTTCAGCTGAGTTCTACAAGGCAGAATCCCAGAAGTTTATTGAGTGTTGTAATTATGGCGATTATCTGAAGAAAGCTGAAAGGCGTCTGAATGAGGAAATGTATAGAGCGATCCATTACTTGGAACCCAAGACAGAAAAGAAGATTACTGATTTGGTAGCTAAGGAGATGATTGAAACTCACATGCTTATATTAATACATATGGAGAATTCAGGGCTAGTAAGCATGCTTTGTGATGACAAATATGAAGATTTGGGTAGAATGTATTACTTGTTCTGCCGTGTTACTGATGGCCTCTCAAAAATATGTGAAGTGATGACTTCACACATTAGAGAGTCTGGTAAACAGCGTGTCACGGATCCTGAAAGGTTGAAGGATCCTGTTCAGTTTGTGCAAAGGCTCTTAGATGAGAAAGATAAGTATGACAAGATTGTGAATTTGGCATTTAACAATAAGTTGTTACAGAATGCTATGAATTCCTCTTTTGAATACTTCATTAACCTGAATCTCCGTTCCCCGGAGTTCATTTCACTCTTTGTAGACGACAAGATTCGGAAAGGTCTCAAGGGAGGAGTTAGTGAGGATGATGTGGAGATTACTCTTGACAAGGTGATGATGCTGTTCTTGCACTTGCAAGAAAAGGATGTGTTTGAAAAGTATTACAAATGGCATCTGGCAAAGCGGCTTTTGTCTGAAAAAACGGTTTCTTATGATGCAGAAAGAAGTCTTATAGTTAACCTCAGGAGAAAATGCGGTCATCAATTCACCTCTAAACTAGAGGGCATGTTAAGAGATATGAAAACATCTTTAGACACAATGCAGGGTTTTTATGGCAGCCCCCCTCAGTTAAGAGATGATTCTACTCCTACACTTACTGTGCAGGTTTTGACATCAAGGTTTTGGCCTATTCAATCTACTGTTACATGTAATCTGCCAGATGAAATATCTGCACTTTGTGACAAGTTTCAGTTGTATTACCTATGCACGCATACCGGTAGGAGATTGTCCTGGCAAACTAATATGGGGACAGCAGAGTTAAAAGCCACTTTTAGTAATGGTCAGAAACATGAGTTAAATGTCTCCACTTACCAAATGTGTGTCCTCATACTGTTTAATGATGCTGATAGACTAAGCTATAGGGAAATTGAGCAAGCAACGAAGATTCCGGCTTCGGATCTCAAGAGATGCCTGCAATCACTGGCTTTGGTTAGAGGAAGAAATGTACTTAGGAAGGATCCTATAAGTAGAGATGTAAATGAGCATGATGCTTTCTCTGTCAATGACCAGTTCAGCAGCAAACTATACAGGGTGAAAATAGGAACTGTAGTTGCACAGAAGGAATCAGAACCTGAGAAACAAGAAACTCGGCAGCAAGTGGAGGAGGACCAGAAGTCTCAGATTGAGGCTGCCATAGTGAGGATCATGAAATCAAGGAAGAAGCTTGATCATAACAATCTCATAGCTAAGGTCACAAAGCAGATGCAGTCGTGGTTCCTCACAAATCCAACTGAGGTAAAGAAACGGATTGAGTCTCTCATTGAGAGGGAATTTTTAGAAAGAGATCACCAAGACAGAGAATTATATCGATATCTTACCTAG 2034 0.3972 MVLLKCGEKLYSGLVTTMTVHIKEIVRSIEAMHGVSFLGEMNRKWNDHNMVLPLIRCILLYMDRCYIPKTRETPIHELSMNLWRENVIYLNQIRTRLLNTLLELVRSECAGEAVINKGLFRNITKMLMDLGPAVYEKEFETHFLQVSAEFYKAESQKFIECCNYGDYLKKAERRLNEEMYRAIHYLEPKTEKKITDLVAKEMIETHMLILIHMENSGLVSMLCDDKYEDLGRMYYLFCRVTDGLSKICEVMTSHIRESGKQRVTDPERLKDPVQFVQRLLDEKDKYDKIVNLAFNNKLLQNAMNSSFEYFINLNLRSPEFISLFVDDKIRKGLKGGVSEDDVEITLDKVMMLFLHLQEKDVFEKYYKWHLAKRLLSEKTVSYDAERSLIVNLRRKCGHQFTSKLEGMLRDMKTSLDTMQGFYGSPPQLRDDSTPTLTVQVLTSRFWPIQSTVTCNLPDEISALCDKFQLYYLCTHTGRRLSWQTNMGTAELKATFSNGQKHELNVSTYQMCVLILFNDADRLSYREIEQATKIPASDLKRCLQSLALVRGRNVLRKDPISRDVNEHDAFSVNDQFSSKLYRVKIGTVVAQKESEPEKQETRQQVEEDQKSQIEAAIVRIMKSRKKLDHNNLIAKVTKQMQSWFLTNPTEVKKRIESLIEREFLERDHQDRELYRYLT 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0344 677 PANTHER CULLIN 1 676 IPR045093 -
Aed11g0344 677 SUPERFAMILY Cullin repeat-like 1 314 IPR016159 -
Aed11g0344 677 Gene3D - 589 677 IPR036388 -
Aed11g0344 677 Pfam Cullin family 2 575 IPR001373 GO:0006511|GO:0031625
Aed11g0344 677 Gene3D Cullin; Chain C, Domain 2 433 588 - -
Aed11g0344 677 ProSiteProfiles Cullin family profile. 316 546 IPR016158 -
Aed11g0344 677 SUPERFAMILY Cullin homology domain 310 585 IPR036317 -
Aed11g0344 677 Gene3D Cullin Repeats 208 314 - -
Aed11g0344 677 Gene3D Cullin Repeats 87 207 - -
Aed11g0344 677 Gene3D Cullin Repeats 315 426 - -
Aed11g0344 677 Pfam Cullin protein neddylation domain 607 669 IPR019559 -
Aed11g0344 677 Gene3D Cullin Repeats 1 85 - -
Aed11g0344 677 PANTHER CULLIN-3A-RELATED 1 676 - -
Aed11g0344 677 SUPERFAMILY "Winged helix" DNA-binding domain 588 676 IPR036390 -
Aed11g0344 677 SMART cul_2 347 495 IPR016158 -
Aed11g0344 677 SMART Cullin_Nedd8_2 604 671 IPR019559 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0344 Aed-Chr11 2861326 2863359 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0344 K03869 - gmx:100795098 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0344 11 2861326 2863359 Aed11g0344 11 2861326 2863359 ECH