Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0312 ATGTCCATGTCCACCGTTGTTGCTGCATTAGACCCTCTCTTCTTCCCTCTTTCTCTTTGCCGGAGAGAACCACCTTCTTCATTTAACCGCCACAAAACCTTCTTTCTTACTTGCTCTAATTCCAACCTCAATGATGATGCGGTTTCCTTCATCTTCCAGCAACCTCGCTGTAGGAATATTATTAGGACTCTCTCTCCCGTGCATGCGGTTTCCCTCACAGACACACCTCTTATCCACTCCCTTCAATGCCCTCACACCATCACCAACACTTTCCCAATTGACCGAATCAAAATGATGGAGGGAAAGATTTTTGTGAGATTAGATCACGGAAAGGGTTTGAGGGATCGGGAGCTTACAGTGGGTTGCAATCTACCCGGAAAATGGATTCTTCATTGGGGAGTTACCTATGCTGATGATGTTGGAAGGGAATGGGATCAACCTCCTCATGATATGATACCTTCCGGATCTGTTTCTATAAAGGACTATGCAATAGAGACCCCTTTGAAGAAATCATCCTCATCTGCTGAAGGAGATACGCTTCATGAAGTCAAGATTTATCTTAAAGCCAACAATGGAATTTCAGCAATTAATTTTGTTCTCAAGGATGAGGAAACAGCAGCTTGGTACAAATACAAAAGAAGAGATTTCAAGGTTTCTTTGGTCAACAACAACAACCTTAAGGAGGATACTAATATGATTGGACCTAAAAGGAGCTTTGGTTTATTGCTAGGGAATTTGGGGAAGATATCTAAAATGTTCCACAAGTCAGAAGAAGAAAATAATCAACCAGAAGGTTTCTTTGAGGAAGTGCCTATCACAAAGAAGGTTTTAGTCAATAACTCTATCAGTGTCTCCACCACAAAATGCTATGAGTCTGGGGCAGTTAAGGACCTTGTACAATTTGAAACTGATCTACTTGGAGATGTCGTCCTTCACTGGGGAGTTTGTAGGGATGATTCAAGAAAGTGGGAACTTCCAAATCCTCCTCATCCACCAGGAACAGTAACATTTAAAGAAAGGGCTTTGAGAACTAAGTTTCAGCCAAGAGATGATGGAAAAGGATCTTCAGCACTAATCACTTTAGAAGAAGAATTTTCAGGGTTTATGTTTGTTATTAAGCAAAATGAAAATACTTGGTTCAAGTACAATGGAAATGACTTTTATATCCCCCTCTCAAGCTTTCCTGAGAGTGGCAACAAAGAGGGTCAGTCAGAAGGTATGCTGAGGGAAGTGATTCAAGAGGCTAGTCAAAATAATTCTTTCTTTGCATTTACTGATACAATAGCAAATGAAATAAGAAATTTTGTCACAGACAATTCCTCTGAGAAGATTCAAAAGACAAAAGACAAAAAAGCGCAACAAAGCATTTTTCAAGAAATTGAAAGGCTAGCTGCTGAAGCCTATAATATATTCAGAAACTCCATTCCAACTTTCTCTGAGGCAGCTGCTGCAGAACCTGAGGTAATTATTGTGGAACCTGAGACAACAACTATTGTGGAACCTCAGGTAACAACTATAGTCATACCTGAGCCTTCAGTGAAACCAGAAACACTATCCCTGGATCCAACAATATGCTCAGGGACAGGCACAGGATATGAAGTATTATGCCAAGGGTTTAACTGGGAATCTCATAAATCTGGAAGATGGTACATGGAGCTTAAAGAGATGGCTTCAGAACTAGCATTACTTGGTTTCACTGTGGTCTGGTTGCCACCACCTACAGAATACGGAAACATTGATGAACTGAAAGATTTGGTGAAAAGATTTCATGAAGTTGGGATCAAAGTTCTAGGAGATGCTGTTTTAAACCACCGCTGTGCTCATTATCAGAATCAAAATGGTATTTGGAACATATTTGGAGGCCCTCTTAACTGGGATGATCGTGCAGTTGTAGCTGATGATCCACATTTTCAGGGCAGGGGCAACAAGAGTAGTGGAGATCATTTTCATGCCGCTCCAAACATTGATCATTCACAGGATTTTGTGAGAAAGGATCTCAAAGAATGGTTATGCTGGTTGAGGAAAGAAATTGGGTATGATGGATGGAGGCTTGACTTTGTGAGAGGATTTTGGGGTGGTTATGTAAAGGACTATATAGATTCAAGTGAAGCTTATTTTGCTGTGGGAGAGTACTGGGATTCCCTCAGTTATACATATAGTGAAATGGATCATAATCAAGATGCTCATAGGCAGAGGATAGTTGATTGGATCAATGCCACTAATGGTACCTCTGGTGCATTTGATGTTACAACAAAAGGGATTCTTCACTCTGCATTAGAAAGATGTGAATATTGGCGATTGTCAGATGAGAAAGGAAAGCCTCCAGGCGTTCTTGGGTGGTGGCCATCTCGCGCTGTTACGTTTGTAGAGAATCATGACACTGGTTCCACTCAGGGTCATTGGAGATTTCCTAGTGGAAAAGAAATGCAAGGATATGCCTACACTCTTACTCACCCAGGAACTCCATCAGTGTTTTATGACCACATTTCCTCTCACTATAAAACTGAAATAGCAAGGCTAATATCTCTCAGGAAGAGGAACAAGGTCCACTGCAGGAGTACAGTTCAAATTAGTAAAGCAGAAAGGGATGTTTATGCAGCCATCATCGATGAAAAAGTTGCAATGAAGATTGGACCTGGACATTTTGAACCACCAAATGACTCCCAAAAATGGACATTAGCTACTGAGGGAAAAGGCTACAAGATTTGGGAAGCATCACAATCATAA 2727 0.4096 MSMSTVVAALDPLFFPLSLCRREPPSSFNRHKTFFLTCSNSNLNDDAVSFIFQQPRCRNIIRTLSPVHAVSLTDTPLIHSLQCPHTITNTFPIDRIKMMEGKIFVRLDHGKGLRDRELTVGCNLPGKWILHWGVTYADDVGREWDQPPHDMIPSGSVSIKDYAIETPLKKSSSSAEGDTLHEVKIYLKANNGISAINFVLKDEETAAWYKYKRRDFKVSLVNNNNLKEDTNMIGPKRSFGLLLGNLGKISKMFHKSEEENNQPEGFFEEVPITKKVLVNNSISVSTTKCYESGAVKDLVQFETDLLGDVVLHWGVCRDDSRKWELPNPPHPPGTVTFKERALRTKFQPRDDGKGSSALITLEEEFSGFMFVIKQNENTWFKYNGNDFYIPLSSFPESGNKEGQSEGMLREVIQEASQNNSFFAFTDTIANEIRNFVTDNSSEKIQKTKDKKAQQSIFQEIERLAAEAYNIFRNSIPTFSEAAAAEPEVIIVEPETTTIVEPQVTTIVIPEPSVKPETLSLDPTICSGTGTGYEVLCQGFNWESHKSGRWYMELKEMASELALLGFTVVWLPPPTEYGNIDELKDLVKRFHEVGIKVLGDAVLNHRCAHYQNQNGIWNIFGGPLNWDDRAVVADDPHFQGRGNKSSGDHFHAAPNIDHSQDFVRKDLKEWLCWLRKEIGYDGWRLDFVRGFWGGYVKDYIDSSEAYFAVGEYWDSLSYTYSEMDHNQDAHRQRIVDWINATNGTSGAFDVTTKGILHSALERCEYWRLSDEKGKPPGVLGWWPSRAVTFVENHDTGSTQGHWRFPSGKEMQGYAYTLTHPGTPSVFYDHISSHYKTEIARLISLRKRNKVHCRSTVQISKAERDVYAAIIDEKVAMKIGPGHFEPPNDSQKWTLATEGKGYKIWEASQS 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0312 908 PANTHER ALPHA-AMYLASE 3, CHLOROPLASTIC 88 906 - -
Aed11g0312 908 CDD AmyAc_arch_bac_plant_AmyA 534 855 - -
Aed11g0312 908 SUPERFAMILY Glycosyl hydrolase domain 849 904 - -
Aed11g0312 908 SUPERFAMILY (Trans)glycosidases 532 828 IPR017853 -
Aed11g0312 908 Gene3D - 849 905 IPR013780 -
Aed11g0312 908 Pfam Alpha-amylase C-terminal beta-sheet domain 846 904 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aed11g0312 908 SMART alpha-amyl_c2 845 905 IPR012850 GO:0004556|GO:0005509|GO:0005975
Aed11g0312 908 PANTHER ALPHA-AMYLASE 88 906 - -
Aed11g0312 908 SMART aamy 533 844 IPR006047 GO:0005975
Aed11g0312 908 Pfam Alpha amylase, catalytic domain 574 824 IPR006047 GO:0005975
Aed11g0312 908 Gene3D Glycosidases 533 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0312 Aed-Chr11 2551514 2558195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0312 73 906 Glycoside Hydrolase AT1G69830 60.743 0.0 1063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0312 K01176 - gmx:100810333 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0312 11 2551514 2558195 Aed11g0312 11 2551514 2558195 ECH