Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0311 ATGGGACAGGCGTTGGGTTGCGTGCAAGTGGATCAGTCAAGTGTGGCCATCAGGGAGGTTTTCGGGAGGTACGATGATGTTCTTGAACCAGGCTGCCACTGTGTTCCATGGTGTTTCGGCAGTCGTGTGGCTGGTGCTCTTTCTTTGCGTGTCAAACAGCTTGATGTTCGTTGTGAAACTAAAACTAAGATTGATACTTTATGTTCTCTTGGTGCTATTTCAGTTATCAGAGCAAGTGTTCCAAAGATGGAACTAGATGCTACATTTGAACAGAAGAACAAAATTGCAAAAGCAGTGGAAGAAGAACTTGAAAAGGCTATGTCAGCTTATGGTTACGAGATAGTCCAGACTCTTATTGTGGATATTGAGCCAGATGAGCATGTGAAGAGAGCCATGAATGAGATAAATGCCGGTATGTTTTCAGATGTTCGTTCATGTTATATTCCATTTCAAGCTTTACAACAACAACAACAAAAAAACCTTATCCCACTCAGCGAGGTCAGCTACATGGATCACACGATGCCATTGAAACAAAATAAATATGTTAGTTTAGTGTGGTGTCTCGGGATTTCCTAG 576 0.4219 MGQALGCVQVDQSSVAIREVFGRYDDVLEPGCHCVPWCFGSRVAGALSLRVKQLDVRCETKTKIDTLCSLGAISVIRASVPKMELDATFEQKNKIAKAVEEELEKAMSAYGYEIVQTLIVDIEPDEHVKRAMNEINAGMFSDVRSCYIPFQALQQQQQKNLIPLSEVSYMDHTMPLKQNKYVSLVWCLGIS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0311 191 Coils Coil 89 109 - -
Aed11g0311 191 Pfam SPFH domain / Band 7 family 74 137 IPR001107 -
Aed11g0311 191 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 74 138 - -
Aed11g0311 191 Gene3D Band 7 domain 43 137 IPR036013 -
Aed11g0311 191 SMART PHB_4 5 136 IPR001107 -
Aed11g0311 191 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2 1 65 - -
Aed11g0311 191 SUPERFAMILY Band 7/SPFH domain 66 135 IPR036013 -
Aed11g0311 191 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 1 65 - -
Aed11g0311 191 PANTHER HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 2 74 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0311 Aed-Chr11 2544983 2547801 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0311 - - gmx:100789295 232.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0311 11 2544983 2547801 Aed11g0311 11 2544983 2547801 ECH