Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0307 ATGGGGTTGGGTGCTGAGAATGGCAAGGTGGTGGAGTCTTGGGATGTGTGTAAATCAGAGGGGAGTAAGAAGAAGAAGAACAACAACAAGGGGGATGAGGATGTAGAAGATGGGGCTGAGGCTGGTTGTTGGGTTAGGCTGAGGTTCATTTCGAGCTGCATTTCTTCAAGATCCAAGGTTGATACCTCAGTTAGTGGCAGTGGCACCAGTACTCATTATGCTGAAAGTAAATCAACTAATGATACTAGTAGAGACCAACCAACAGCTCCAGCAGTCCCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCCAAACTTGAAGAGGATCTTAAAATTGCTTCCAGGCTGCGAAAGTTCTCTTTCAATGATCTCAAGTTAGCCACAAGAAATTTTCGGCCTGAGAGTTTTCTTGGTGAAGGTGGGTTTGGTTGTGTTTTCAAGGGGTGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGAACAGGGCTTACGGTTGCTGTCAAAACCTTAAACCATGATGGGCTCCAGGGATCCATGCCTCTTCCATGGTCAATTAGAATGAGAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTTATATATAGGGATTTTAAAACTTCGAATATACTATTAGATGCAGTCATCTTACATCAAAAAGTGATGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTGA 738 0.435 MGLGAENGKVVESWDVCKSEGSKKKKNNNKGDEDVEDGAEAGCWVRLRFISSCISSRSKVDTSVSGSGTSTHYAESKSTNDTSRDQPTAPAVPSTTTSNAESNSSTSKLEEDLKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGSMPLPWSIRMRIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAVILHQKVMCTVSEWYYLRC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0307 245 PANTHER OS01G0588500 PROTEIN-RELATED 64 181 - -
Aed11g0307 245 PANTHER OS01G0588500 PROTEIN-RELATED 182 226 - -
Aed11g0307 245 MobiDBLite consensus disorder prediction 1 37 - -
Aed11g0307 245 Gene3D Phosphorylase Kinase; domain 1 95 180 - -
Aed11g0307 245 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 64 181 - -
Aed11g0307 245 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 182 226 - -
Aed11g0307 245 Gene3D Transferase(Phosphotransferase) domain 1 181 234 - -
Aed11g0307 245 SUPERFAMILY Protein kinase-like (PK-like) 120 226 IPR011009 -
Aed11g0307 245 MobiDBLite consensus disorder prediction 59 110 - -
Aed11g0307 245 MobiDBLite consensus disorder prediction 59 106 - -
Aed11g0307 245 MobiDBLite consensus disorder prediction 16 37 - -
Aed11g0307 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Aed11g0307 245 ProSitePatterns Protein kinases ATP-binding region signature. 140 172 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0307 Aed-Chr11 2508688 2512444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0307 102 225 Receptor kinase-like Gene Family AT5G45780 33.529 3.52e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0307 - - gmx:100787151 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0307 11 2508688 2512444 Aed11g0307 11 2508688 2512444 ECH