Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0301 ATGGAAGTAGAAGCTCCAGAAGGTAGCACATGGGAAGGGTATGTGGACTGGAGGAACAAACCTGCTCTTAGAAAACGCCATGGAGGCATGCTTGCAGCTTCCTTTGTTCTGGTGGCGGAGATATTGGAGAATCTGGCGTTTCTGGCGAATGCGAGCAACTTGGTATTGTATCTGAGGCAGTACATGCACATGTCACCTTCAAAATCTGCTAACAATGTCACAAATTTCATGGGAACAGCTTTTCTTCTTGCTCTCCTCGGTGGTTTCTTATCTGATGCATTTTTCACCTCGTATCGTGTCTACCTCATAAGTGCACTTATTGAGTTCCTGGGTCTGATTGTACTCACCATTCAAGCTCGTGATCCTTCATTGAAACCACCAAAGTGTGATCACTTAGGCACTCCATGCCAAGAAGTTAATGGTGGAAAAGCAGCAATGTTGTTCGCTGGCCTCTATTTGGTGGCTTTGGGGGTTGGAGGAATAAAAGGGTCACTGCCAGCACATGGTGGTGAGCAATTTGATGAAACCACACCATCTGGAAGGAAGCAGAGATCAACCTTCTTCAACTACTTTGTCTTCTGTCTATCCTGTGGTGCCCTCATTGCAGTTACTTTTGTGGTGTGGATTGAAGACAACAAAGGGTGGCAATGGGGGTTTGCAATTTCTACTATTAGCATATTTGTGTCTATCCCTGTGTTCTTGGCCGGTTCAGCTACTTACAAGAACAAGATCCCTTCAGGAAGTCCACTTACTACCATTTTAAAGGTTTTGGTTGCTTCTTTACTGAACACCTGCACCTACAAAAACACCAGCAGTGCTGTTGTGAACATGGCTTCAAGCCCTTCTAATCCACACTCAGGTAGAAAGGAATCATCTCAAGAAACAGTAGTAAAAGCAAGCACAGCAACAACAGTTTCAGCCCCAACAAGCCACCTCAAGTTTCTCAACAAAGCAGCAACAAACAAGCCAAGGCACTCATCACTAGAATGCACAGTGCAGCAAGTAGAAGATGTCAAGGTAGTAGTCAAAGTGCTACCAATATTTGCCTGCACCATAATCCTCAACTGTTGCCTAGCTCAGCTTTCCACATTCTCTGTTGAACAAGCAGCCACTATGGACACCAAGCTTGGTTCCCTCAAGGTTCCACCATCTTCACTACCAGTTTTCCCTGTGGTGTTCATCATGATCCTAGCACCAATATATGACCACATCATCATACCCTACACAAGGAAAGCAACAAAATCAGAAATGGGAATCACACACCTCCAAAGGATTGGTTTTGGATTAGTACTCTCTATAGTTGCAATGGCAGTGGCTGCTCTTGTTGAGATCAAAAGAAAAAGGGTAGCCACACACTCAGGACTACTTGATGATCCAACAAAACCACTCCCTATAACATTCTTGTGGATTGCTTTTCAGTACTTGTTCCTTGGTTCTGCTGATCTTTTCACCTTGGCTGGTTTGTTGGAGTTTTTCTTCTCAGAGGCACCAATAAGAATGAGATCATTGGCCACATCACTCTCTTGGGCCTCTTTGGCAATGGGGTATTACCTTAGTTCAGTGATTGTGTCAATAGTGAACAGTGTCACTGGAAGTGGCACACACAAACCATGGCTTTCTGGTGCCAACTTTAACCACTACCACCTTGAGAAGTTCTATTGGCTCATGTGTGTGCTGAGTGGGTTGAACTTCCTGCATTACCTGTATTGGGCCACCAAGTACAAATATAGAGGGATAGGTGCTACTAATTAG 1752 0.4452 MEVEAPEGSTWEGYVDWRNKPALRKRHGGMLAASFVLVAEILENLAFLANASNLVLYLRQYMHMSPSKSANNVTNFMGTAFLLALLGGFLSDAFFTSYRVYLISALIEFLGLIVLTIQARDPSLKPPKCDHLGTPCQEVNGGKAAMLFAGLYLVALGVGGIKGSLPAHGGEQFDETTPSGRKQRSTFFNYFVFCLSCGALIAVTFVVWIEDNKGWQWGFAISTISIFVSIPVFLAGSATYKNKIPSGSPLTTILKVLVASLLNTCTYKNTSSAVVNMASSPSNPHSGRKESSQETVVKASTATTVSAPTSHLKFLNKAATNKPRHSSLECTVQQVEDVKVVVKVLPIFACTIILNCCLAQLSTFSVEQAATMDTKLGSLKVPPSSLPVFPVVFIMILAPIYDHIIIPYTRKATKSEMGITHLQRIGFGLVLSIVAMAVAALVEIKRKRVATHSGLLDDPTKPLPITFLWIAFQYLFLGSADLFTLAGLLEFFFSEAPIRMRSLATSLSWASLAMGYYLSSVIVSIVNSVTGSGTHKPWLSGANFNHYHLEKFYWLMCVLSGLNFLHYLYWATKYKYRGIGATN 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0301 583 SUPERFAMILY MFS general substrate transporter 31 575 IPR036259 -
Aed11g0301 583 PANTHER PROTEIN NRT1/ PTR FAMILY 4.6 15 579 - -
Aed11g0301 583 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 579 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed11g0301 583 CDD MFS_NPF4 30 571 - -
Aed11g0301 583 Pfam POT family 99 539 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed11g0301 583 Gene3D MFS general substrate transporter like domains 3 579 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0301 Aed-Chr11 2474505 2481484 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0301 1 581 Organic Solute Cotransporters AT1G69850 72.913 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0301 - - gmx:100794723 1026.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0301 11 2474505 2481484 Aed11g0301 11 2474505 2481484 ECH
Aed7g1739 7 20776374 20779164 Aed11g0301 11 2474505 2481484 PCT