Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0297 ATGCACTTCCTCACCGCACCCTCCTCTTCTCTTCTCCTCGCACCCCATTTGACCCCTTCTTCGCTCGCCCCCCCACCACTCCACTTCTCCGGTTCGACCCGGCGGGTGCTCCGGCTCGCGGTTGAACCCGGTTCGGTTATCCGTTATTCTCTCTGGAAGGAGGGGCGCCACGTTAACCGCTACAAGGGTTTGTGGTTGACCTGCTCCGGGTTCTTGCGGCGGTGCAAGGGCTGGGACGGAGAGTTCTCCTCTCTTGAGTCGCAGGTTTTGGAGTTCATGCAGAGTAGCGATAAGCCTGAAGTGTTTCCCACGAAGGAAGAGTTGGTTGCTGCCGGGAGAGTGGATTTGGTCAACGCTATTGTTGAAGAAGGAGGGTGGCTCGCGTATGGGTGGAATATGAATGGTGGGTCCGATGAAATTCGCGGTTTTGAAGATAATAGTAGCGGTGGAAGTGAGAGTAATGCGCCTCGGGCTTCTGGGGTTTCTTCTTCTTCTTCTCAATCAGATTATTCAGTGGAAATTGAAGCTGGTGAATCTGGTATTGAGGGCATATTGAATCGGTTGGAGAAACAAAGAAATAAATCTTTTGGATTAGACTTGGATAATATTTCTTTTGAAAATAATGAAGATAAAGATGAATGGGATCATAGAACCACAACGGATGCAATAGCTGCTGGCGTAGAAAATAGTAGCAGAGCATCATCATTGAGCCCTACAAGCAGTCATCTCAGTGGTTCTCAGATCAAACATGATCCACACGTATCTCAATTAGGTACTGAAAATGACCTGCTTAAGCCAGAGATGTGGAGGAGTTGGATTATTCAGAGAACTGGTTTCCAGGATGCAGATTTTGAAGATGCTGAAATTGTTCCCAGTGAAACTGAGAAAGGAGGCATAAGTGATGCTTCAGGACAACAGGATATTCTCAACAAAAACGAGTTTTCTTCTGAACATATAAACAGAGAGACAGGATTTTATTCTCTTGATGGAAATGCAAATCACAAGGACATTAAATCCCGTATCCATAATCTGGAATCGGAGCTATCTTCTATACTTCACTTGTTGAGGTCTAGCTCGGATAAAATTACAATGCAGATGGTCCAAAAGAGCTCTTCTGATGGTCTAGGAAAGCTTTCTGATGCTTGGGAATTCCAGGAAAATGAGATCATGAATGCTCAGGACAGATTGCGTTCTATACGGGCTAAGTTGTCAGTGTTAGAAGGAAAGATGGCATTGTCAATAATGGATGCACATAAGGTAGTTGAAGAAAAGCAGAAGAAGATTAAAAAAGCTCAAAAAGCTTTGCAAATTCTGAAAACTACTTGTGTAGTTTGGCCTACTAATGCTTCAGAAGTACTTTTAATAGGATCATTTGATGGTTGGTCCACCAAGAGAAAGATGGAGAAGTTAAGGAGTGGTGTATTTTCTTTGAACTTGCAGCTGTATCCTGGAAGATACGAGATGAAATTCATTGTAGATGGAGAATGGAAAATTGATCCATTGCGCCCTGTTGTTAACAGCAATGGCTACGAGAATAATCTTCTCACCATTTATGATAATTGA 1563 0.4383 MHFLTAPSSSLLLAPHLTPSSLAPPPLHFSGSTRRVLRLAVEPGSVIRYSLWKEGRHVNRYKGLWLTCSGFLRRCKGWDGEFSSLESQVLEFMQSSDKPEVFPTKEELVAAGRVDLVNAIVEEGGWLAYGWNMNGGSDEIRGFEDNSSGGSESNAPRASGVSSSSSQSDYSVEIEAGESGIEGILNRLEKQRNKSFGLDLDNISFENNEDKDEWDHRTTTDAIAAGVENSSRASSLSPTSSHLSGSQIKHDPHVSQLGTENDLLKPEMWRSWIIQRTGFQDADFEDAEIVPSETEKGGISDASGQQDILNKNEFSSEHINRETGFYSLDGNANHKDIKSRIHNLESELSSILHLLRSSSDKITMQMVQKSSSDGLGKLSDAWEFQENEIMNAQDRLRSIRAKLSVLEGKMALSIMDAHKVVEEKQKKIKKAQKALQILKTTCVVWPTNASEVLLIGSFDGWSTKRKMEKLRSGVFSLNLQLYPGRYEMKFIVDGEWKIDPLRPVVNSNGYENNLLTIYDN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0297 520 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 18 517 - -
Aed11g0297 520 SUPERFAMILY E set domains 440 517 IPR014756 -
Aed11g0297 520 MobiDBLite consensus disorder prediction 144 172 - -
Aed11g0297 520 Coils Coil 389 409 - -
Aed11g0297 520 MobiDBLite consensus disorder prediction 226 255 - -
Aed11g0297 520 Pfam Glycogen recognition site of AMP-activated protein kinase 441 518 IPR032640 -
Aed11g0297 520 CDD E_set_AMPKbeta_like_N 440 517 - -
Aed11g0297 520 MobiDBLite consensus disorder prediction 140 172 - -
Aed11g0297 520 Coils Coil 414 441 - -
Aed11g0297 520 Gene3D Immunoglobulins 437 520 IPR013783 -
Aed11g0297 520 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 18 517 - -
Aed11g0297 520 MobiDBLite consensus disorder prediction 226 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0297 Aed-Chr11 2429815 2435170 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0297 - - gmx:100814629 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0297 11 2429815 2435170 Aed11g0297 11 2429815 2435170 ECH