Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0294 ATGTTGGATAATGGAGAAAAACTCTCTGCCGTATCTCACTCTTCTTGGTCACTTCTATGCTGTAGAAGTGGCATTTCTTCAACTTCATCGGCAGCAAAAAGAGAGAAAAACAGTGATGAAGAAGAACTAAGCAAAAATAGTTCAAGATCATCAGCAAATAAGAACCAAGGAGGATGGAAGGCTATGCCTTTTATTTTAGGAAATGAAACTTTTGAGAGGTTGGCTGCATTTGGTTTGTTTGCTAACTTTATGGTGTATTTGACAAGAGAGTTTCATTTGGACCAAGTTTATGCTTCAAACATTCTCAACATATGGAGTGGTGTCACCAACTTCTTCCCTTTGATTGGTGCCTTCATTTCTGATGCTTATGTGGGTCGCTTCACAACTATAGCTTTTGCTTCCTTTTCTTCACTACTGGGAATGGTGGTGGTGACTTTAACAGCATGGTTACCACAGCTGCATCCTCCACCATGCAGTCCTCAGCAACAAGCACTGAACCAATGTGTTAAAGCTAGCACAGGCAACATAGGTGTTCTACTGACGGGACTCTGTCTCTTAAGCGTAGGGTCAGCTGGCATAAGGCCATGTAGCATCCCATTCGGTGTGGACCAATTCGACCCCACGACAGATGAAGGGAAGAAAGGGATAAACAGCTTCTTCAATTGGTACTACACCACTTTCACCGTGGTGTTGTTGATCACTCAAACAGTGGTTGTCTACATCCAAGACTCTGTGAGCTGGAAGATAGGTTTTGCTATACCGAGCGTGTGCATGCTCTGCTCCATTGTTATGTTCTTTGTGGGAAAAGGGATCTACGTGCATGTGAAGCCGGAGGGAAGTATTTTCACTAGCATTGCACAGGTTCTTGTGGCTGCTTATAGAAAACGAAAACTTCAGCTTCCAACTCAGAAGCATGTTCATGGCCTTGGGGTTTTCTATGATCCTCCACTTATTGGGACACACGTCTTGTCAAAGCTACCACTCACCAACCAATTCCGGGCATTGAATAAAGCAGCCGTGATAATGGACGGTGAGCTGAACCCTGATGGGAGTAGAGTTGATAAGTGGGAACTAGTCAGCATCCAACAAGTGGAAGAGGTAAAATGCTTGGCCAGAATCTTCCCAATTTGGGCAGCTGGGATCCTTGGATTCACTGCCATGGCACAACAAGGCACATTCACAGTGTCACAGGCCATGAAAATGGACAGACACCTAGGACCAAAATTCCAAATCCCAGCAGGCTCACTTGGAGTCATATCATTCATCACAATAGGTGTGTGGGTCCCATTCTATGACAGAATCATGGTTCCAGCACTGAGGAGACACACCAAGCATGAGGGTGGCATCACTCTCCTCCAGAGGATTGGAATTGGCATGCTTTTCTCCATCTTGTCAATGCTTGCTGCTGCATTTGTAGAAAAAGTTAGAAGACATTCGGCAAATGCAAATTCAAATTCAATTGCCCCAATGTCAGTCCTCTGGCTGGTCCCACAACTAGTCCTGATGGGTATGTGTGAGGCATTCAATGTAATTGGACAGATTGAGTTCTACAACAGGCAATTCCCTGAGCACATGAGAAGCATTGCTAATGCATTGTTCTCATGCTCTTTTGCTGGGGCTAGCTATGTTAGCAGTGCACTTGTCACCTTTGTTCATCATGTCACTGGAACACATGATCATCCTGATTGGTTGACTAATGATATAAACCATGGAAGGCTTGATTACTTTTACTATTTAATAGCAGGGATTGGAGTCCTCAACTTGGCTTATTTTCTGGTTGTGGCTCAGAGGTATCATTACAAGGGAAGTGGTGCTGGTGGTGACCTCCAGGATCATAAAGCTGATCAAGATGTGGAGTTGGATTACTATAGTGCTGCTAAGTATGAGAATTCTAAATAA 1899 0.4413 MLDNGEKLSAVSHSSWSLLCCRSGISSTSSAAKREKNSDEEELSKNSSRSSANKNQGGWKAMPFILGNETFERLAAFGLFANFMVYLTREFHLDQVYASNILNIWSGVTNFFPLIGAFISDAYVGRFTTIAFASFSSLLGMVVVTLTAWLPQLHPPPCSPQQQALNQCVKASTGNIGVLLTGLCLLSVGSAGIRPCSIPFGVDQFDPTTDEGKKGINSFFNWYYTTFTVVLLITQTVVVYIQDSVSWKIGFAIPSVCMLCSIVMFFVGKGIYVHVKPEGSIFTSIAQVLVAAYRKRKLQLPTQKHVHGLGVFYDPPLIGTHVLSKLPLTNQFRALNKAAVIMDGELNPDGSRVDKWELVSIQQVEEVKCLARIFPIWAAGILGFTAMAQQGTFTVSQAMKMDRHLGPKFQIPAGSLGVISFITIGVWVPFYDRIMVPALRRHTKHEGGITLLQRIGIGMLFSILSMLAAAFVEKVRRHSANANSNSIAPMSVLWLVPQLVLMGMCEAFNVIGQIEFYNRQFPEHMRSIANALFSCSFAGASYVSSALVTFVHHVTGTHDHPDWLTNDINHGRLDYFYYLIAGIGVLNLAYFLVVAQRYHYKGSGAGGDLQDHKADQDVELDYYSAAKYENSK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0294 632 CDD MFS_NPF1_2 62 598 - -
Aed11g0294 632 Gene3D MFS general substrate transporter like domains 30 604 IPR036259 -
Aed11g0294 632 MobiDBLite consensus disorder prediction 31 55 - -
Aed11g0294 632 Pfam POT family 127 557 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed11g0294 632 MobiDBLite consensus disorder prediction 33 47 - -
Aed11g0294 632 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 44 609 IPR000109 GO:0016020|GO:0022857|GO:0055085
Aed11g0294 632 SUPERFAMILY MFS general substrate transporter 75 595 IPR036259 -
Aed11g0294 632 PANTHER PEPTIDE/NITRATE TRANSPORTER 44 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0294 Aed-Chr11 2413949 2421168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0294 53 627 Organic Solute Cotransporters AT1G69870 62.565 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0294 - - gmx:100815154 1056.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0294 11 2413949 2421168 Aed11g0294 11 2413949 2421168 ECH
Aed7g1736 7 20731857 20734767 Aed11g0294 11 2413949 2421168 PCT