Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0262 ATGGCCACCACCCACACTCAATTCCTCATCCTCTCACTCCCACCACGCTACCCTTCTTCTTCTTCTTCATTAACATTTCTTCCAATAACAACAACAACAAGCACCACTCTCCTATTCTCTCTCCTTCGCCCTCGATCCCTTCCATTTCCCCTCAAATTCCGTGCCTCATTCTCTTTCAAGTCCCCGACCTCAACGCTCCGCGCCTTCTCCGACGCCGAGGAAGACGAAGAAGTAGAAGAAGACTACGAAGACGAAGAAGAAGAAGATGAAGAAGATGATGAAGAAGAAGAAAACGAAGAAGACGATGACGACATCGCTGCCGACGAATACGACGACGTTTCCGACGAAGAGACCGAAGTGTTTGCTCGACACGACGGACTCAAGTGGCAGAGAGTTGAGAAGCTATGCAACGAAGTCAGGGAGTTCGGCGCCGATCTCATCGACGTGGAGGAGCTCGCGTCTGTATACGACTTCCGCATCGACAAGTTTCAGCGGCAGGCGATACTGGCGTTTCTGAGAGGCTTCTCGGTGGTGGTTTCCGCTCCGACGAGCAGCGGGAAGACGCTCATTGCGGAGGCCGCGGCGGTGGCCACGGTGGCTAGGGGACGGCGGATTTTCTACACGACGCCGCTCAAGGCGCTGTCCAATCAGAAGTTTCGCGAGTTCCGCGAAACTTTTGGCGACAGTAATGTTGGCCTTCTCACTGGTGATTCTGCTGTGAACAAAGATGCTCAGGTTTTGATTATGACCACAGAGATATTGCGCAACATGTTGTATCAGAGTGTTGGTAATGTTTCTTCTGGAGGTGGACTTGTAAATGTTGATGTGATTGTTTTGGATGAAGTTCATTACCTTAGTGACATATCTCGCGGTACAGTCTGGGAGGAGATTGTTATTTATTGCCCTAAAGAAGTTCAACTTATTTGCCTGTCAGCGACTGTTGCAAATCCAGATGAGTTGGCTGGGTGGATTCGTCAGATCCATGGTGAAACAGAATTGGTAACATCATCAAAACGTCCAGTTCCATTGACTTGGCATTTCTCTCTGAAGAATTACTTATTACCACTTCTTAACGAGAAAGGAACACACATGAACAGGAAGCTATCACTCAATTATTTACAACTTCAAGCTGCAGCAGCTAAACCTTACAAGGATGATTGGACTAGAAAAAGGAATTCTCGGAAACGAGGATCTCACTCAAGCTATGATAGTGATGATAACTTGTTCGAACAACGTTCTCTTTCAAAGAATAACATAAATGCAATTCGTCGATCCCAAGTTCCTCAAGTAATTGATACATTATGGCAACTTCAGTCCAGGGATATGCTGCCAGCTATTTGGTTTATTTTTAGCAGGAAGGGTTGTGATGCGGCTGTGCAATATCTTGAAAATTGCAAACTTTTAGATGAGTGTGAAACAAGTGAGGTTGAACTAGCCTTGAAAAGGTTCCGCAAGCAGTATCCTGATGCTGTCAGAGAATCAGCTGCAAGAGGACTTTTGCAAGGGGTTGCTGCCCATCATGCTGGATGTCTACCTTTGTGGAAGGCATTCATAGAAGAGTTGTTTCAAAGAGGACTTGTCAAGGTTGTTTTTGCTACAGAAACCCTGGCTGCTGGAATCAATATGCCTGCTAGAACAGCTGTTATTTCATCCCTCAGCAAAAGAGGTGATAGTGGACGTGTCCCATTACGCTCGAATGAACTGCTTCAGATGGCTGGGCGTGCTGGACGCAGAGGCATTGATGAAAATGGTCATGTAGTTCTCATCCAAACTCCTAATGAAGGTGCTGAAGAGGGCTGCAAAGTACTGTTTTCTGGACTAGAGCCTCTAGTGTCACAGTTTACTGCTTCATATGGAATGGTTTTGAATCTTCTTGCTGGTGTGAAAGCCATTCATAGGTCAAATGAATCAGATAACACGAAACCTTCCACAGGGAAAACTTTGGAAGAAGCTAGGAAATTAGTTGAGCAGAGTTTTGGAAATTATGTTAGTAGCAATGTAATGCTGGCTGCTAAAGAGGAAATTAATAAAATTGAAAAAGAAATTGAGTTGCTGATGTCAGGCATTACTGATGAAGCCATAGATAGAAAAAGCAGGAAGGCTTTATCACCAAGACAATACAAGGAAATTGCAGAATTACTTGAAGATTTAAGGGCAGAAAAGCGTGTTCGGTCTGAATTGCGGAAACAGAAGGAAGCAAAGAGAATATCTGCCCTGAAGCCTTTGTTGGAGGAGCCCGAAAGTGGACATCTACCATTTTTGTGCTTGCAGTACAGAGATTCTGAAGGAGTTGAACATTCCATTCCTGCTGTGTTTTTGGGGAAGGTCACCTCCCTTAATGCTTCAAAACTCAAAAATATGATTTCTTCTGCATTGAATTTAGCAGATGCAGAGCCAAGTGTTGCTGATTCTGAAGTGAATGAAGATCTTGAACCATCATATCATGTGGCTCTTGGTTCAGATAACACTTGGTATCTATTTACAGAAAAGTGGATTAAAACGGTATATGGGACAGGATTTCCTAATGTTCCATTGTCTGAAGGGGATGCTCGACCTCGAGAAATTATGAGTACTCTCCTTGATAAGGAGGACATGAAGTGGGATAAGCTTTCTCAATCTGAGCATGGTGGTTTATGGTTCATGGAAGGATCTTTGGATACATGGTCTTGGAGCTTGAATGTTCCTGTTTTGAGTAGCTTATCTGAAAATGATGAGCTACTACTACAGTCTCAAGACTACAAAGATGCCATTGAACGTTACAAGGAACAAAGAAATAAAGTTTCACGGTTGAAGAAAAAGATAGCTCGTAGTGATGGCTATAAAGAATATTTTAAAATCATAGACGCAGTCAAGTTTACTGAAGAGAAAATCAAGCGCCTGAAAAATAGATCTAAACGTTTGACTAATCGGATAGAACAAATTGAACCCTCAGGTTGGAAGGAGTTTATGCAGGTTAGCAAGGTCATTCATGAACTTAGAGCTTTAGATATTAATACGCATATCATATTCCCACTTGGTGAAACTGCTGCTGCAATTCGAGGAGAAAATGAGCTATGGCTCGCGATGGTTCTTCGCAGTAAAATCTTACTAGAACTAAAACCTGCACAACTTGCTGCAGTGTGCGCAAGTTTGGTGTCCAATGGTATCAAAATCCGACCTGGGAAAGATAACAGTTACATTTATGAGCCTTCTGCAACTGTAACCAAATTCATAACGTTATTGGATGAGCAAAGAAAAGCCTTATTGGCAATGCAGGATAAACATGAGGTGACAATCTCTTGCTGTTTGGATAACCAGTTTTGTGGTATGGTTGAGGCCTGGGCTTCTGGGTTGACATGGAGAGAATTAATGATGGATTGTGCAATGGATGATGGCGATTTAGCTCGTCTCCTTCGACGGTCCATTGATCTGTTAGTTCAGATTCCAAAATTGCCAGACATTGATCCATTGTTGAAACGCAATGCAAAGGCTGCTTCTGATGTCATGGATCGGCCACCAATAAGTGAACTTGTGGGGTAA 3519 0.4345 MATTHTQFLILSLPPRYPSSSSSLTFLPITTTTSTTLLFSLLRPRSLPFPLKFRASFSFKSPTSTLRAFSDAEEDEEVEEDYEDEEEEDEEDDEEEENEEDDDDIAADEYDDVSDEETEVFARHDGLKWQRVEKLCNEVREFGADLIDVEELASVYDFRIDKFQRQAILAFLRGFSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGGGLVNVDVIVLDEVHYLSDISRGTVWEEIVIYCPKEVQLICLSATVANPDELAGWIRQIHGETELVTSSKRPVPLTWHFSLKNYLLPLLNEKGTHMNRKLSLNYLQLQAAAAKPYKDDWTRKRNSRKRGSHSSYDSDDNLFEQRSLSKNNINAIRRSQVPQVIDTLWQLQSRDMLPAIWFIFSRKGCDAAVQYLENCKLLDECETSEVELALKRFRKQYPDAVRESAARGLLQGVAAHHAGCLPLWKAFIEELFQRGLVKVVFATETLAAGINMPARTAVISSLSKRGDSGRVPLRSNELLQMAGRAGRRGIDENGHVVLIQTPNEGAEEGCKVLFSGLEPLVSQFTASYGMVLNLLAGVKAIHRSNESDNTKPSTGKTLEEARKLVEQSFGNYVSSNVMLAAKEEINKIEKEIELLMSGITDEAIDRKSRKALSPRQYKEIAELLEDLRAEKRVRSELRKQKEAKRISALKPLLEEPESGHLPFLCLQYRDSEGVEHSIPAVFLGKVTSLNASKLKNMISSALNLADAEPSVADSEVNEDLEPSYHVALGSDNTWYLFTEKWIKTVYGTGFPNVPLSEGDARPREIMSTLLDKEDMKWDKLSQSEHGGLWFMEGSLDTWSWSLNVPVLSSLSENDELLLQSQDYKDAIERYKEQRNKVSRLKKKIARSDGYKEYFKIIDAVKFTEEKIKRLKNRSKRLTNRIEQIEPSGWKEFMQVSKVIHELRALDINTHIIFPLGETAAAIRGENELWLAMVLRSKILLELKPAQLAAVCASLVSNGIKIRPGKDNSYIYEPSATVTKFITLLDEQRKALLAMQDKHEVTISCCLDNQFCGMVEAWASGLTWRELMMDCAMDDGDLARLLRRSIDLLVQIPKLPDIDPLLKRNAKAASDVMDRPPISELVG 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0262 1172 Gene3D - 340 609 IPR027417 -
Aed11g0262 1172 Coils Coil 950 970 - -
Aed11g0262 1172 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 593 IPR027417 -
Aed11g0262 1172 MobiDBLite consensus disorder prediction 66 106 - -
Aed11g0262 1172 Coils Coil 72 102 - -
Aed11g0262 1172 MobiDBLite consensus disorder prediction 72 106 - -
Aed11g0262 1172 Pfam DEAD/DEAH box helicase 163 315 IPR011545 GO:0003676|GO:0005524
Aed11g0262 1172 Coils Coil 668 688 - -
Aed11g0262 1172 Coils Coil 903 933 - -
Aed11g0262 1172 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 168 332 IPR014001 -
Aed11g0262 1172 SMART DSHCT_2 997 1171 IPR012961 -
Aed11g0262 1172 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 426 625 IPR001650 -
Aed11g0262 1172 Pfam DSHCT (NUC185) domain 1002 1167 IPR012961 -
Aed11g0262 1172 CDD SF2_C_Ski2 423 591 - -
Aed11g0262 1172 PANTHER DEXH-BOX ATP-DEPENDENT RNA HELICASE DEXH15 CHLOROPLASTIC 64 1168 - -
Aed11g0262 1172 Coils Coil 710 730 - -
Aed11g0262 1172 Gene3D - 121 339 IPR027417 -
Aed11g0262 1172 Gene3D - 954 1164 - -
Aed11g0262 1172 SMART helicmild6 493 579 IPR001650 -
Aed11g0262 1172 SMART ultradead3 156 346 IPR014001 -
Aed11g0262 1172 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 64 1168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0262 Aed-Chr11 2160966 2166792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0262 K26077 - gmx:100780908 2000.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0262 11 2160966 2166792 Aed11g0262 11 2160966 2166792 ECH