Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0242 ATGTCCGATCCTTCGAGGGGCCGCGTTACCATTACTCTTGGGCGTAGCGGTCAGGTTGTGAAGAGGGATGTTTCTGGTGTAGATGTTTCTTCTTTCTCTTCTCTACCTTCAGCTGGAACTAAGCGGTCTGTTAGAGACAGAATTGGAAATAATGCAGATAGTTCTGGGTGGCATGGAAATGGATTTGGCGGCAGTAAACGTCATCGAGGAGATGTAAGCATGCAAAATGGACTGGACGGCAATGATCTTCGATTGAAGCTCATGCAAAAAAGTGCATCTAGGGGGCAGGCGGACGGCAATGGAAGTAAAAGGCATATGGATCTCCGTGAAAAACTTTCAAAGGCAAGTCACCCTCTGACTAACAGTTTTAATTCGAAGCAGCATAGGCCAGAATCAAGGGAAACAAGTTTGATGAGGCAAATTCCCTCGGCTAGAAGTTCTGATGATCTGCTGCGTATGGAATCCATGAGGAGCTCATACTCTCCTTGGACATTGGATCATATTAGGAGAAGATCACCAGATGGGTTTCCAAGTACTTCTAGGGGGATTTCCCCCCAAAGGGATGCCCAAGACCTGCAGAGAAGGCCTTTAAACAGGACATATGATGGTGTCAGACCAGTTCAATATGTAGGTAGGGATGTTCTTGAAACTTCGAGGCCTCCAGCAAGTACACCTCAATCTTTCATGTCACGCTCCACAATGTCAACATTGCCTCCAGTAACTGCCAAGCCTGTAGCATCTCATCCTGGCCAACTTCCTCCATCAGGCAGTGTTGCTCAAAGGCCTTCATATGTGGGTGATGAACAAGTACAACATGCAACCCAAACTGTGGATGGCCTGTTACATGCACTGGGACTTCAAAAATATGCCATTCTCTTTAAGGCTGAGGAAGTGGATATGACTGCATTGAAGCAAATGGGAGAAAATGACCTCAAAGAGCTTGGAATTCCTATGGGTCCAAGGAAAAAAATTCTTCTCGCTCTCTTGCCTCGCACCAAGCGGCAACAATGA 1011 0.4659 MSDPSRGRVTITLGRSGQVVKRDVSGVDVSSFSSLPSAGTKRSVRDRIGNNADSSGWHGNGFGGSKRHRGDVSMQNGLDGNDLRLKLMQKSASRGQADGNGSKRHMDLREKLSKASHPLTNSFNSKQHRPESRETSLMRQIPSARSSDDLLRMESMRSSYSPWTLDHIRRRSPDGFPSTSRGISPQRDAQDLQRRPLNRTYDGVRPVQYVGRDVLETSRPPASTPQSFMSRSTMSTLPPVTAKPVASHPGQLPPSGSVAQRPSYVGDEQVQHATQTVDGLLHALGLQKYAILFKAEEVDMTALKQMGENDLKELGIPMGPRKKILLALLPRTKRQQ 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0242 336 MobiDBLite consensus disorder prediction 216 266 - -
Aed11g0242 336 MobiDBLite consensus disorder prediction 219 240 - -
Aed11g0242 336 PANTHER OSJNBA0060P14.15 PROTEIN 1 335 - -
Aed11g0242 336 SMART SAM_4 269 334 IPR001660 GO:0005515
Aed11g0242 336 MobiDBLite consensus disorder prediction 29 71 - -
Aed11g0242 336 MobiDBLite consensus disorder prediction 167 195 - -
Aed11g0242 336 Pfam SAM domain (Sterile alpha motif) 274 328 IPR001660 GO:0005515
Aed11g0242 336 Gene3D - 274 336 IPR013761 -
Aed11g0242 336 PANTHER PA-PL1 PHOSPHOLIPASE FAMILY 1 335 - -
Aed11g0242 336 ProSiteProfiles SAM domain profile. 272 335 IPR001660 GO:0005515
Aed11g0242 336 MobiDBLite consensus disorder prediction 112 152 - -
Aed11g0242 336 SUPERFAMILY SAM/Pointed domain 273 328 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0242 Aed-Chr11 2011420 2017087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0242 271 328 Glycosyltransferase AT3G07170 60.345 6.59e-17 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0242 - - gmx:100797199 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0242 11 2011420 2017087 Aed11g0242 11 2011420 2017087 ECH