Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0236 ATGGTTCATAATCAGCAGAGGCAAAGCAGCAGCAGCAACGTCCACGTTGTTGTTCTGCCATACCCAGCCCAAGGCCACATCAACCCCCTGGTCCAATTCGCAAAACGACTCGCCTCCAAGGGCGTGAAAGCCACAGTCGCCACCACGCACTACACCGCGGGCTCCATCGCCGCCCCCAACATCACCGTCGAGCCCATCTCCGACGGCTTCGACGAGTCCGGCTTCGCCCAAACCAACAACAACGTCCACCTCTTCCTCTCCTCCTTCAGAAAACACGGCTCCAGAACCCTCTCCCAGCTCGTGCAGAACCACCTCCACACTCCCTCCCCCGTCACATGCATTGTCTACGACTCCTTCTTCCCCTGGGCTCTCGATGTCGCCAAGAAGCACGGTATCTACGGAGCCTCGTTTTTCACCAACTCTGCTGCGGTGTGTAACATTTTCTGCCGCATCCACCACGGCCTCCTCGAGCTCCCGGTTAAGACGGAGGACCTTCCGCTGCGTGTCCCCGGGCTTCCTCCGCTCGACTCTCATGCCCTCCCGAGCTTCATCAAGTTCCCGGACAGCTACCCAGCTTATATGGCCATGAAATTGAGCCAATTCTCCAACTTGAACCAGGCGGATTGGATGTTCGTCAACACCTTTGAAGCATTGGAAAGCGAGGTGGTGAAAGGCTTAATGGAGGTCTTTCCGGCGAAGTTGATAGGGCCAATGGTCCCTTCTGGATACTTGGACGGGAGGATTAAAGGGGACAAAGGGTATGGAGCGAGTCTATGGAAGCCGCTAACTGAAGACTGCAGCAAGTGGTTGGAAGCAAAGGCGCCTCAGTCTGTGGTGTACATCTCCTTTGGGAGCATGGTGTCACTGACAGAAGAGCAGATGGAAGAGGTGGCATGGGGGTTGAAAGAAAGTGGGGTGAGTTTCTTGTGGGTTTTAAGAGAGTCTGAGCATGGAAAACTGCCATGTGGGTACAGAGACCTGGTGAAAGACAAGGGTCTAATTGTGACATGGTGCAACCAGCTTGAATTGCTTGCTCACCAAGCCACTGGCTGCTTTGTCACACACTGTGGCTGGAATTCCACCCTTGAAAGCCTTAGCCTCGGTGTTCCGGTGGTGTGTCTGCCACAGTGGGCTGACCAGCTGCCTGATGCCAAGTTTTTGGATGAAATATGGAAGGTTGGTGTGTGGCCTAAGGAGGATGAGAAAGGAGTTGTGAGGAAGCAAGAGTTTGTCAAGAATTTGAAAGTTGTGATGGAGGGTGAGAGAAGCCAAAAGATTAGAAGAAATGCCAATAAATGGAAGAAGTTGGCCAGGGAAGCAGTTGATGAAGGAGGCAGCTCTGATAAACACATTGCTCAGTTTGTTAATCATTTGATGAATGCAGATAAGAATGGAAGTTTGAATGTATACTGA 1413 0.5244 MVHNQQRQSSSSNVHVVVLPYPAQGHINPLVQFAKRLASKGVKATVATTHYTAGSIAAPNITVEPISDGFDESGFAQTNNNVHLFLSSFRKHGSRTLSQLVQNHLHTPSPVTCIVYDSFFPWALDVAKKHGIYGASFFTNSAAVCNIFCRIHHGLLELPVKTEDLPLRVPGLPPLDSHALPSFIKFPDSYPAYMAMKLSQFSNLNQADWMFVNTFEALESEVVKGLMEVFPAKLIGPMVPSGYLDGRIKGDKGYGASLWKPLTEDCSKWLEAKAPQSVVYISFGSMVSLTEEQMEEVAWGLKESGVSFLWVLRESEHGKLPCGYRDLVKDKGLIVTWCNQLELLAHQATGCFVTHCGWNSTLESLSLGVPVVCLPQWADQLPDAKFLDEIWKVGVWPKEDEKGVVRKQEFVKNLKVVMEGERSQKIRRNANKWKKLAREAVDEGGSSDKHIAQFVNHLMNADKNGSLNVY 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0236 470 Gene3D Glycogen Phosphorylase B; 253 439 - -
Aed11g0236 470 PANTHER UDP-GLYCOSYLTRANSFERASE 74B1 11 463 - -
Aed11g0236 470 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 462 - -
Aed11g0236 470 Gene3D Glycogen Phosphorylase B; 18 451 - -
Aed11g0236 470 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 11 463 - -
Aed11g0236 470 CDD GT1_Gtf-like 19 440 IPR002213 GO:0008194
Aed11g0236 470 ProSitePatterns UDP-glycosyltransferases signature. 337 380 IPR035595 -
Aed11g0236 470 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 254 393 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0236 Aed-Chr11 1959818 1962841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0236 15 458 Glycosyltransferase AT1G24100 51.116 1.00e-165 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0236 K11820 - gmx:100787855 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0236 11 1959818 1962841 Aed11g0236 11 1959818 1962841 ECH