Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g0230 ATGGTACCAGTGGCTGAGAGCATCAAAAGAGCTGCACCACCGCCTAAGCCGGAAGAGCTTCAGCCACACCCTGTGAAAGATCAACTTCCAAATAATTTTGATGTTGATGAAGCGGAGGCGATACTACTTGGTTTCCAACATTACTTGGTGATGCTTGGCACAACTGTTCTAATACCAACCACTCTTGTTACTCAAATGGGAGGAGGAAATGAAGAGAAAGCAAAAATGATCCAGACTCTGCTGTTTGTAGCTGGCATAAACACATTGTTCCAAACACTATTTGGGACTCGTCTACCTGCAGTTATTGGAGGATCCTACACCTTTGTGCCAACTACCATTTCAATCATTTTGGCTGGTCGCTACAGTGACATTGTGAATCCTCAGGAGAGATTTGAGAGGATAATGCGGGGAACACAGGGTGCGCTTATTGTTGCTTCAACCCTTCAAATTGTTGTTGGCTTCAGTGGTCTTTGGCGCAATGTAGTGAGGTTCTTAAGCCCTCTCTCTGCTGTTCCCTTGGTTGCTCTGTCAGGCTTTGGACTTTATGAGTTGGGATTTCCTGTGTGGTGTTCCTTTGTCCAGTACATTCCTCATGTGATGAAAGGAGAAAGGCCTATCTTTGATCGATTTGCAGTACTATTCTCAGTGACAATTGTGTGGATTTATGCTCATCTTCTAACTGTGGGTGGAGCATATAAGAATGTACCACAGACAACTCAGAATACTTGCAGAACTGATCGTGCTGGAATTATAAGTGGTGCACCTTGGATTAGAATCCCTTATCCTTTCCAATGGGGAGCTCCTACATTTGATGCTGGGGAAGCTTTCGCTACAATGGCCGCTTCATTTGTTGCACTAGTAGAGTCAACAGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTTCTTAGCCGCGGTGTCGGTTGGCAGGTTCCTCAGGCCTCGGTTTCCTTCAGTTTTGCAATTTAA 990 0.4505 MVPVAESIKRAAPPPKPEELQPHPVKDQLPNNFDVDEAEAILLGFQHYLVMLGTTVLIPTTLVTQMGGGNEEKAKMIQTLLFVAGINTLFQTLFGTRLPAVIGGSYTFVPTTISIILAGRYSDIVNPQERFERIMRGTQGALIVASTLQIVVGFSGLWRNVVRFLSPLSAVPLVALSGFGLYELGFPVWCSFVQYIPHVMKGERPIFDRFAVLFSVTIVWIYAHLLTVGGAYKNVPQTTQNTCRTDRAGIISGAPWIRIPYPFQWGAPTFDAGEAFATMAASFVALVESTGAFIAVSRYASATPLPPSVLSRGVGWQVPQASVSFSFAI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g0230 329 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 11 318 - -
Aed11g0230 329 Pfam Permease family 39 185 IPR006043 GO:0016020|GO:0022857|GO:0055085
Aed11g0230 329 Pfam Permease family 201 314 IPR006043 GO:0016020|GO:0022857|GO:0055085
Aed11g0230 329 MobiDBLite consensus disorder prediction 1 29 - -
Aed11g0230 329 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 11 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g0230 Aed-Chr11 1898878 1903915 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g0230 12 317 Organic Solute Cotransporters AT1G60030 73.538 7.49e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g0230 - - gmx:100814601 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g0230 11 1898878 1903915 Aed11g0230 11 1898878 1903915 ECH
Aed11g0230 11 1898878 1903915 Aed7g1680 7 20145491 20150338 PCT