LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g0043	ATGAGGAAGTGGACGCTTGCTTCCGCTCTTCTTCTTCTCTCTCTCCTACTTCTCTTTGCAGATCAAGGTCGAAAGTTTCAGGCGAATGCTGAGGGCGATTCAGACGAGCTTGTAGATCCACCTAAGGTTGAGGACAAGATCGGTGCTGTGCCTCATGGCCTTTCCACCGATTCAGATGTCGTCAAGAGGGAGGCGGAGTCGATCTCCAAGAGATCTCTCCGGAGCAGCGCGGAGAAGTTTGAATTCCAAGCAGAAGTGTCGCGCCTTATGGATATTATCATCAACTCTCTCTACAGTAACAAGGATATCTTCCTCAGAGAGTTGATTTCCAATGCTTCTGATGCTTTGGACAAGATTAGGTTCCTCTCCCTAACGGATAAGGAGGTTTTGGGAGAAGGTGATAACACCAAGCTTGACATTCAGATTAAGTTAGACAAGGAAAAGAAAATTCTCTCGATCCGAGACAGGGGTATCGGTATGACAAAGGAGGATTTGATAAAGAATTTGGGTACCATAGCTAAATCGGGAACTTCTGCATTTGTTGAGAAAATGCAAACAAGTGGAGATCTCAATCTGATTGGGCAGTTTGGAGTTGGTTTCTACTCTGTTTATCTTGTGGCCGACTATGTCGAAGTCATTAGCAAGAATAATGATGATAAGCAGCATGTATGGGAATCAAAAGCTGATGGGGCATTTGCAATTTCGGAAGATACATGGAATGAACCACTAGGACGTGGAACTGAGATTAGATTACACCTCAAGGAAGAGGCTGGGGAGTACTTGGAGGAGTCTAAACTGAAAGAATTGGTGAAGAGATACTCTGAATTTATTAACTTCCCTATCTATCTTTGGGCAAGCAAAGAGGTTGATGTGGAAGTTCCCGCTGATGAAGATGATTCCAGTGATGAAGATGATTCACCTGAAGGAATTTCCAAGGAGGAAACCGAAGATGAAGATGCTGATGATGAAAAAAAGCCCAAGACAAAGACAGTGAAGGAAACAACTTATGAATGGGAGCTTTTAAATGATGTGAAAGCTATATGGCTGAGGAACCCAAAGGAGGTTACAGAAGAAGAATACACCAAATTCTACCACTCTCTTGCCAAGGATTTCAGTGACGAGAAACCTTTATCATGGAGTCATTTCACTGCTGAAGGTGATGTCGAGTTCAAGGCAGTGCTGTTTGTACCACCTAAGGCACCTCAAGATTTATATGAGAGCTATTATAACGCAAACAAATCCAACCTGAAGTTGTATGTTAGACGTGTGTTCATTTCAGATGAATTCAATGAACTGTTGCCTAAGTACCTAAACTTTTTGCTGGGTCTTGTTGATTCTGACACATTGCCACTTAATGTATCGCGAGAAATGCTTCAACAACATAGTAGTCTAAAGACAATCAAGAAGAAACTTATTAGGAAAGCCCTTGATATGATCCGTAGGATTGCCGAGGAGGATCCTGATGAGTCCTCTGACAAAGAAAAGAAAGGTATGGTCACCAAGTCTGAGGGTAAATTCACTTCTCTGGATCAGTACATAGCTAGAATGAAAGCTGGGCAGAAGGATATCTTTTACATAACTGGAACCAGCAAAGAACAACTGGAAAAATCTCCATTCCTCGAGCGGCTGAAGAAGAAAAATTTTGAGGTTATTTACTTCACAGATCCAGTTGATGAATACTTGATGCAATACTTGATGGATTATGAAGATAAGAAGTTCCAGAATGTGTCCAAGGAGGGTTTGAAACTTGGAAAGGATTCAAAAGACAAGGAGCTGAAGGAATCCTTTAAGGATCTTACCAAATGGTGGAAAACTGCTCTTTCCAAAGACAATGTTGATGATGTGAAGATATCCAACCGATTGGACAACACTCCTTGTGTAGTTGTGACATCAAAGTTTGGTTGGAGTGCTAACATGGAGAGAATCATGCAGTCTCAAACTTTGTCAGATGCTAGCAAGCAAGCATACATGCGTGGCAAGAGGGTTCTTGAGATCAATCCTAGGCACCCTATTATCAAGGAGCTCCGGGAAAGAGTAGTAAAGAACCCTGAGGATGAGAGTGTGAAGCATACAGCACAGCTGATGTACCAGACTGCACTCTTCGAAAGTGGCTTTCTGCTTGATGATCCCAAGGATTTTACTTCCCGTATTTATGATTCAGTGAAGACTAGCTTGGAAATCAGTCCTGAAGCAACAGTTGAGGAGGAAGATGATACTGAAGTAGAGGCTGAAAGTGATACGAAAGAAGATGCATCTACTACATCAAAGCCCGAAGCTGATGCGGTTAATGACGCTGCTGCTGATGATGATGATGTCAGGGACGAGTTGTAG	2331	0.4251	MRKWTLASALLLLSLLLLFADQGRKFQANAEGDSDELVDPPKVEDKIGAVPHGLSTDSDVVKREAESISKRSLRSSAEKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLSLTDKEVLGEGDNTKLDIQIKLDKEKKILSIRDRGIGMTKEDLIKNLGTIAKSGTSAFVEKMQTSGDLNLIGQFGVGFYSVYLVADYVEVISKNNDDKQHVWESKADGAFAISEDTWNEPLGRGTEIRLHLKEEAGEYLEESKLKELVKRYSEFINFPIYLWASKEVDVEVPADEDDSSDEDDSPEGISKEETEDEDADDEKKPKTKTVKETTYEWELLNDVKAIWLRNPKEVTEEEYTKFYHSLAKDFSDEKPLSWSHFTAEGDVEFKAVLFVPPKAPQDLYESYYNANKSNLKLYVRRVFISDEFNELLPKYLNFLLGLVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRRIAEEDPDESSDKEKKGMVTKSEGKFTSLDQYIARMKAGQKDIFYITGTSKEQLEKSPFLERLKKKNFEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDSKDKELKESFKDLTKWWKTALSKDNVDDVKISNRLDNTPCVVVTSKFGWSANMERIMQSQTLSDASKQAYMRGKRVLEINPRHPIIKELRERVVKNPEDESVKHTAQLMYQTALFESGFLLDDPKDFTSRIYDSVKTSLEISPEATVEEEDDTEVEAESDTKEDASTTSKPEADAVNDAAADDDDVRDEL	776

Annotation information

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Aed11g0043	776	PANTHER	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	19	492	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662
Aed11g0043	776	Hamap	Chaperone protein HtpG [htpG].	75	722	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662
Aed11g0043	776	MobiDBLite	consensus disorder prediction	726	776	-	-
Aed11g0043	776	Gene3D	-	343	483	-	-
Aed11g0043	776	MobiDBLite	consensus disorder prediction	730	745	-	-
Aed11g0043	776	SUPERFAMILY	HSP90 C-terminal domain	598	720	IPR037196	-
Aed11g0043	776	MobiDBLite	consensus disorder prediction	293	320	-	-
Aed11g0043	776	PANTHER	BNAA08G14800D PROTEIN	499	755	-	-
Aed11g0043	776	Pfam	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	101	256	IPR003594	-
Aed11g0043	776	PIRSF	HSP90_HTPG	54	765	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662
Aed11g0043	776	SUPERFAMILY	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	78	287	IPR036890	-
Aed11g0043	776	SMART	HKATPase_4	100	257	IPR003594	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	99	121	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	263	281	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	193	215	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	168	185	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	78	98	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	245	262	IPR020575	-
Aed11g0043	776	PRINTS	90kDa heat shock protein signature	150	167	IPR020575	-
Aed11g0043	776	PANTHER	HEAT SHOCK PROTEIN 90 FAMILY MEMBER	499	755	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662
Aed11g0043	776	Gene3D	-	496	586	-	-
Aed11g0043	776	MobiDBLite	consensus disorder prediction	293	330	-	-
Aed11g0043	776	Gene3D	-	65	299	IPR036890	-
Aed11g0043	776	ProSitePatterns	Heat shock hsp90 proteins family signature.	98	107	IPR019805	GO:0005524\|GO:0006457\|GO:0051082
Aed11g0043	776	CDD	HATPase_Hsp90-like	87	277	-	-
Aed11g0043	776	Gene3D	-	587	732	IPR037196	-
Aed11g0043	776	PANTHER	BNAA08G14800D PROTEIN	19	492	-	-
Aed11g0043	776	SUPERFAMILY	Ribosomal protein S5 domain 2-like	344	579	IPR020568	-
Aed11g0043	776	Pfam	Hsp90 protein	259	486	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662
Aed11g0043	776	Pfam	Hsp90 protein	500	750	IPR001404	GO:0005524\|GO:0006457\|GO:0016887\|GO:0051082\|GO:0140662

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g0043	Aed-Chr11	302803	307429	Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g0043	K09487		-	gmx:100779976	1335.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed11g0043	11	302803	307429	Aed11g0043	11	302803	307429	ECH