Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2058 ATGGATGAAGAGTACGATGTAATTGTCTTGGGCACAGGTCTCAAGGAATGCATCCTCAGTGGCCTTCTCTCTGTTGATGGCCTCAAGGTGTTGCACATGGATAGAAATGACTACTATGGAGGGGCTTCTACATCTCTCAATCTCACACAGTTTATGATGGCCAATGGAGCTTTGGTCCGTGTGCTCATTCACACAAATGTTACAAAGTATTTGAACTTCAAAGCTGTAGATGGAAGCTTTGTGTATAATAAGGGAAAGAAGCGCCGAGCTCGGAAGTTCTTCATTTATGTCCAAGATTATGATTTAAGTGATCCCAAATCTCACGAAGGACTAGATTTGAACCAAGTTACAGCAAGGCAGCTGATATCGAAATATGGATTGGAAGATGATACAATTGATTTTATTGGTCATGCCTTGGCACTTCATCGTGATGATAGTTACTTGGACGAGCCAGCCAAGGATTTTGTAGAGAGAGTTAAGATTTATGCAGAGTCCCTAGCACGCTTTCAAGGAGGTTCACCTTACATATATCCACTATATGGATTGGGAGAGTTGCCTCAGGCATTTGCACGTCTGAGTGCTGTGTATGGTGGAACTTACATGCTGAACAAGCCAGAATGCAAAGTAGAATTTGACGAAAGTGGGAAAGCCATTGGTGTGACTTCAGAAGGAGAAACAGCCAAATGCAAGAAAGTTGTGTGTGATCCATCATATCTGTCTGATAAGGTTCAGAAGGTTGGAAAGGTTGCTCGTGCAATATGTATAATGAGTCATCCTATTCCAGACACTAAGGACTCTCACTCAGCACAAGTCATTCTGCCACAGAAGCAGCTTGGTCGCAAATCAGATATGTACCTCTTCTGCTGCTCTTATGCTCACAATGTAGCAGCCAAAGGAAAATACATTGCTTTTGTTACAACAGAAGCAGAGACTGACCAACCTGAGAGCTATGATGCTACCACACACTTTGAAACCACAGTAAAAGATGTGGTTGAGCTGTACAGTAAGATCACTGGAAAGGTTCTTGATCTTTCGGTGGACTTGAGTGCTGCAAGTGCTACAGCTGAAGAATGA 1074 0.4283 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGASTSLNLTQFMMANGALVRVLIHTNVTKYLNFKAVDGSFVYNKGKKRRARKFFIYVQDYDLSDPKSHEGLDLNQVTARQLISKYGLEDDTIDFIGHALALHRDDSYLDEPAKDFVERVKIYAESLARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDESGKAIGVTSEGETAKCKKVVCDPSYLSDKVQKVGKVARAICIMSHPIPDTKDSHSAQVILPQKQLGRKSDMYLFCCSYAHNVAAKGKYIAFVTTEAETDQPESYDATTHFETTVKDVVELYSKITGKVLDLSVDLSAASATAEE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2058 357 PANTHER RAB GDP-DISSOCIATION INHIBITOR 50 86 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 SUPERFAMILY FAD/NAD(P)-binding domain 1 239 IPR036188 -
Aed10g2058 357 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 1 81 174 - -
Aed10g2058 357 Pfam GDP dissociation inhibitor 87 315 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 Pfam GDP dissociation inhibitor 1 50 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 PRINTS Rab GDI/REP protein family signature 6 24 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 PRINTS Rab GDI/REP protein family signature 24 41 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 Gene3D - 1 59 IPR036188 -
Aed10g2058 357 PANTHER RAB GDP-DISSOCIATION INHIBITOR 316 354 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 PANTHER RAB GDP-DISSOCIATION INHIBITOR 1 51 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 PANTHER GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 316 354 - -
Aed10g2058 357 PANTHER GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 1 51 - -
Aed10g2058 357 PANTHER GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 50 86 - -
Aed10g2058 357 PANTHER RAB GDP-DISSOCIATION INHIBITOR 87 315 IPR018203 GO:0005092|GO:0007264
Aed10g2058 357 Gene3D Guanine Nucleotide Dissociation Inhibitor, domain 2 209 338 - -
Aed10g2058 357 SUPERFAMILY FAD/NAD(P)-binding domain 315 345 IPR036188 -
Aed10g2058 357 PANTHER GUANOSINE NUCLEOTIDE DIPHOSPHATE DISSOCIATION INHIBITOR 87 315 - -
Aed10g2058 357 SUPERFAMILY FAD-linked reductases, C-terminal domain 243 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2058 Aed-Chr10 24424776 24428782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2058 K17255 - gmx:100815284 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2058 10 24424776 24428782 Aed10g2058 10 24424776 24428782 ECH