Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2015 ATGGAAGCCAATCAGAGGATTGCAAGAATCTCTGCTCATCTTCACCCTCCAAATTTCCAGGAAGGGAGTGATGTTATTCTTAAGAGTGCTGAGTGCAGAGCAAAGGGTGGGGCACCTGGATTCAAAGTTGCAATTTTGGGGGCTGCTGGGGGAATTGGTCAATCCCTTTCTTTGTTGATGAAGATCAATCCATTGGTTTCAGTTCTTCATCTTTATGATGTTGTCAACACCCCTGGTGTTCGTGGCTTTCTGGGGCAGCCACAACTTGAGAGTGCACTCACTGGCATGGACTTGGTAATCATACCTGCTGGGGTGCCAAGGAAACCTGGGATGACAAGGGATGATTTATTTAAAATAAATGCTGGAATTGTGAGGACCCTTAGTGAAGGAATCGCCAAGTGCTGCCCCAATGCAATTGTCAACTTGATTAGCAATCCGGTGAATTCCACCGTTCCTATTGCTGCAGAGGTTTTCAAGAAAGCCGGTACATATGATCCAAAGCGACTACTGGGTGTTACAGCCCTTGATGTTGTGAGGGCAAATACCTTTGTGGCAGAGGTACTTGGAGTTGATCCAAGAGAGGTTGATGTTCCAGTGGTGGGAGGTCATGCTGGGGTCACAATTTTGCCTCTTTTGTCACAGGTTAAACCTCCCAGTAGCTTCACAGCAGAAGAAACTGAATACCTGACAAATCGCATCCAAAATGGTGGAACTGAAGTTGTTGAGGCAAAAGCTGGGACTGGTTCTGCAACACTATCAATGGCGTATGCTGCTGCCAAGTTTGCTGATGCATGCCTCCGTGGCTTAAAAGGAGAAGCTGGTGTGGTGGAGTGTGCTTTTGTTGATTCTCAGGTTACGGAACTTCCCTTCTTTGCAACCAAGGTACGTCTTGGTCGTGCTGGAGCAGAAGAGGTTTATCAGCTTGGTCCCCTGAATGAGTATGAAAGGATTGGATTGGAAAAGGCAAAGAAAGAGTTAGCAGGAAGCATTCAGAAGGGTATAGAGTTCATCAGAAAATAA 1020 0.4637 MEANQRIARISAHLHPPNFQEGSDVILKSAECRAKGGAPGFKVAILGAAGGIGQSLSLLMKINPLVSVLHLYDVVNTPGVRGFLGQPQLESALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLSEGIAKCCPNAIVNLISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTALDVVRANTFVAEVLGVDPREVDVPVVGGHAGVTILPLLSQVKPPSSFTAEETEYLTNRIQNGGTEVVEAKAGTGSATLSMAYAAAKFADACLRGLKGEAGVVECAFVDSQVTELPFFATKVRLGRAGAEEVYQLGPLNEYERIGLEKAKKELAGSIQKGIEFIRK 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2015 339 Pfam lactate/malate dehydrogenase, alpha/beta C-terminal domain 173 336 IPR022383 GO:0016616
Aed10g2015 339 PANTHER MALATE AND LACTATE DEHYDROGENASE 3 339 - -
Aed10g2015 339 Gene3D - 33 172 - -
Aed10g2015 339 PIRSF Lac_mal_DH 40 337 IPR001557 GO:0016616|GO:0019752
Aed10g2015 339 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 40 171 IPR036291 -
Aed10g2015 339 SUPERFAMILY LDH C-terminal domain-like 172 337 IPR015955 GO:0003824|GO:0016616
Aed10g2015 339 Gene3D - 173 339 IPR015955 GO:0003824|GO:0016616
Aed10g2015 339 TIGRFAM MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 42 338 IPR010097 GO:0006099|GO:0030060
Aed10g2015 339 CDD MDH_glyoxysomal_mitochondrial 41 337 IPR010097 GO:0006099|GO:0030060
Aed10g2015 339 Pfam lactate/malate dehydrogenase, NAD binding domain 42 171 IPR001236 GO:0016491
Aed10g2015 339 PANTHER MALATE DEHYDROGENASE 2, PEROXISOMAL 3 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2015 Aed-Chr10 24140706 24144443 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2015 K00026 - gmx:100799793 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2015 10 24140706 24144443 Aed10g2015 10 24140706 24144443 ECH