Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g2012 ATGTTTATAACGCACAACCTCACCACTTCACTCTCTTCTTCTTCCTCTGTTTTCTTAGCTCCCTCTTCCTTCAATTCCAGGGGACAGGTTTCATTGCCTGTGAAGAGCGTGAGCATTTGCAAATGCGTTGCGATACCCGAAGCTGAGACCGCCTACAAGACAGGGGTCACTCGCAATCCAAATATCGGGAAACTTCAAGCTGGCTATCTCTTTCCTGAGGTTGCTAGAAGAAGGTCTGCACACTTGCTGAAGCACCCTGATGCTAAAGTAATAAGCCTTGGAATTGGTGATACTACTGAACCTATTCCTGAAGTCATAACTGATGCAATGTCAAAGAGATCACATGCATTGGCGACTATAGAAGGATACAGTGGGTATGGAGCTGAACAAGGTGAAAAGCCATTGAGAAGTGCAATTGCTTCAACATATTACAGTGATCTTGGCATAGAAGAGGATGATATATTTGTCTCAGATGGAGCAAAATGTGATATATCTCGTCTCCAGATTGTCTTTGGGTCAAATGTAAAAATGGCTGTGCAAGACCCTTCATACCCGGCCTATGTAGACTCAAGTGTAATTATGGGCCAGACTGGCCTCTACCAGCAGGATGTTGAGAAGTTTGCAAACATTGAATACATGAGGTGTAATCCGGAAAATGGTTTCTTCCCTGATTTGTCCTCAATTTCTCGACCAGATATAATTTTTTTTTGTTCTCCAAACAATCCTACTGGTGCTGCAGCAACAAGGGAACAAATGACCCAACTAGTTAAGTTTGCTAAGGACAATGGTTCTATAGTAATCCATGATTCAGCTTATGCAATGTATATTTCTGGTGACAACCCACGCTCCATCTTTGAAATTCCTGGAGCCAAAGAGGTTGCCATTGAGACTTCATCATTTAGCAAGTATGCTGGGTTCACTGGAGTCCGATTGGGTTGGACTGTGATTCCAAAGCAGTTGCTGTTTTCTGATGGATTTCCTGTTGCCAAGGACTTCAACCGTATTGTATGCACTTGTTTCAATGGTGCATCAAATATTTCCCAGGCAGGTGGTCTGGCTTGCCTTTCACCGGATGGTCTTAAGGCTATGCGAGAGGTTATTGGATTCTACAAAGAAAACACTAACATAATAATGGAGACATTTGATTCTCTTGGGTTTAAAGTCTATGGAGGGAAAGATGCACCATATGTGTGGGTCCATTTTCCTGGCCAAAGCTCATGGGATGTATTTGGTGAGATTCTTGAGAAGACTCATGTGGTTACAACCCCTGGCAGTGGTTTTGGACCTGGTGGTGAAGGTTTTGTCAGGGTTAGTGCCTTTGGTCACAGGGAAAATGTCTTGGAGGCATGCAGAAGGTTCAAGCAGCTATACAAGTGA 1377 0.435 MFITHNLTTSLSSSSSVFLAPSSFNSRGQVSLPVKSVSICKCVAIPEAETAYKTGVTRNPNIGKLQAGYLFPEVARRRSAHLLKHPDAKVISLGIGDTTEPIPEVITDAMSKRSHALATIEGYSGYGAEQGEKPLRSAIASTYYSDLGIEEDDIFVSDGAKCDISRLQIVFGSNVKMAVQDPSYPAYVDSSVIMGQTGLYQQDVEKFANIEYMRCNPENGFFPDLSSISRPDIIFFCSPNNPTGAAATREQMTQLVKFAKDNGSIVIHDSAYAMYISGDNPRSIFEIPGAKEVAIETSSFSKYAGFTGVRLGWTVIPKQLLFSDGFPVAKDFNRIVCTCFNGASNISQAGGLACLSPDGLKAMREVIGFYKENTNIIMETFDSLGFKVYGGKDAPYVWVHFPGQSSWDVFGEILEKTHVVTTPGSGFGPGGEGFVRVSAFGHRENVLEACRRFKQLYK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g2012 458 PANTHER LL-DIAMINOPIMELATE AMINOTRANSFERASE, CHLOROPLASTIC 8 458 - -
Aed10g2012 458 CDD AAT_like 91 455 - -
Aed10g2012 458 Gene3D Aspartate Aminotransferase, domain 1 70 454 IPR015422 GO:0003824
Aed10g2012 458 PANTHER AMINOTRANSFERASE 8 458 IPR019942 GO:0008483
Aed10g2012 458 Pfam Aminotransferase class I and II 89 453 IPR004839 GO:0009058|GO:0030170
Aed10g2012 458 Hamap LL-diaminopimelate aminotransferase [dapL]. 57 456 IPR019942 GO:0008483
Aed10g2012 458 Gene3D - 100 357 IPR015421 GO:0003824
Aed10g2012 458 TIGRFAM DAPAT_plant: LL-diaminopimelate aminotransferase 57 455 IPR019942 GO:0008483
Aed10g2012 458 SUPERFAMILY PLP-dependent transferases 69 453 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g2012 Aed-Chr10 24118760 24130365 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g2012 K10206 - gmx:100801405 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g2012 10 24118760 24130365 Aed10g2012 10 24118760 24130365 ECH