Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1969 ATGGCCGTAGCTGACCCCAAGCCTCACTCCGAACCTAAGGTCTGGAATTTCTTCAAGCTTCCGTTCCGCCATTCCAACGCCGCCAATACGACGCCGTCTTCCGCCAACCTTCACCATCTTCATCACCACAACCACAACCCTAATAGCACTCACAATCTCCCCCTGGAGGGCTCCACTTCCCACACCTCCAATTCTGTTTCCTCCGTCGCGAGATCGCTTCTCCCGACACGACGTCGTCTCAAGCTCGATCCATCCAGCAAGCTTTACTTCCCTTATGAGCCGGGGAAACAGGTTAGGAGTGCTATCAGGATTAAAAACACCAGTAAATCTAATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGCTGTTTCATGCGTCCTCCTGGGGCTATCCTCACACCTGGTGAGAGTATCATAGCAACAGTGTTCAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCTGAAAAAACTGGACTCAAATTTAAAATCATGAGCTTGAAGGTGAAAGGAACAATTGATTACGTCCCTGAACTGTTTGATGAGCTGAAGGACCAAGTAGCAGTGGAGCAGATTTTGCGAGTTGTTTTTCTAGATCCAGAGCGTCCTTGTCCTGCTTTGGAAAAACTGAAACGACAGCTGGCTGATGCTGATGCTGCCCTTGAGGCGCGTAAGAAACCTGCGGAAGATGCAGGTCCTAAAATTATCGGGGAAGGGCTTGTCATAGACGAATGGAAAGAGAGGAGGGAAAGATACCTCGCAAAGCAGCAGGGTGAAGTGGTGATGCAGATGGCTGAGATTTGTCGACAAACTAAGAACTAA 825 0.4824 MAVADPKPHSEPKVWNFFKLPFRHSNAANTTPSSANLHHLHHHNHNPNSTHNLPLEGSTSHTSNSVSSVARSLLPTRRRLKLDPSSKLYFPYEPGKQVRSAIRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILTPGESIIATVFKFVEQPENNEKPEKTGLKFKIMSLKVKGTIDYVPELFDELKDQVAVEQILRVVFLDPERPCPALEKLKRQLADADAALEARKKPAEDAGPKIIGEGLVIDEWKERRERYLAKQQGEVVMQMAEICRQTKN 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1969 274 Pfam MSP (Major sperm protein) domain 80 188 IPR000535 -
Aed10g1969 274 ProSiteProfiles Major sperm protein (MSP) domain profile. 79 199 IPR000535 -
Aed10g1969 274 PANTHER VESICLE-ASSOCIATED MEMBRANE-PROTEIN-ASSOCIATED PROTEIN-RELATED 39 259 - -
Aed10g1969 274 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 39 259 IPR016763 GO:0005789
Aed10g1969 274 MobiDBLite consensus disorder prediction 47 72 - -
Aed10g1969 274 Gene3D Immunoglobulins 75 203 IPR013783 -
Aed10g1969 274 MobiDBLite consensus disorder prediction 29 72 - -
Aed10g1969 274 SUPERFAMILY PapD-like 68 207 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1969 Aed-Chr10 23876648 23881339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1969 - - gmx:100801956 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1969 10 23876648 23881339 Aed10g1969 10 23876648 23881339 ECH