Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1320 ATGGCAACAAATTTTCTCTCAACCTCAAACCACTTCCTACTACCTAGTTCATCGCCATCCTCAACATATGTTTACTACAATAATCCCATCAAATGCACTGTGAAGAGGGAATTAACTCTCTGCAAAGCAGAGCATTCTCCAGTTCGGACAAAAAGAGGCCTCCTCCTGTCCATCAGCTTCATCACCGGTGGCTTCATGCTCGCATTGGCTGATGGTAAGAATGCAAATTCAGCTATACTTGAGGCTGATGATGATGAAGAGCTGTTGGAGAAAGTAAAGCTTGGTCAAGCACTTGAAAAAAATGATCTTTCTGCTGCTGGTTCTGTCCTTGGGGGAAGCACCGATGTAGATTGGGTTCAAAGAGCTAATATAGCCCTCAATAAATTGAGCTCCAATCCTGAAGAGAAAACCGAGGTGGACGCATTCAATTCCTCATTAGCTTCACTGATTTCATCAGTTTCTAAGAACGATGTTGAGTCTTCCAAAATTGCTTTTGTATCTTCTGCCACTGCATTTGAGAAGTGGACTTCCATCACAGGGCTTGCTGCGCAGCTTAAGGGCCTCTGA 567 0.4392 MATNFLSTSNHFLLPSSSPSSTYVYYNNPIKCTVKRELTLCKAEHSPVRTKRGLLLSISFITGGFMLALADGKNANSAILEADDDEELLEKVKLGQALEKNDLSAAGSVLGGSTDVDWVQRANIALNKLSSNPEEKTEVDAFNSSLASLISSVSKNDVESSKIAFVSSATAFEKWTSITGLAAQLKGL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1320 188 PANTHER THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC 93 188 IPR038862 GO:0010206
Aed10g1320 188 PANTHER THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC 1 93 IPR038862 GO:0010206
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1320 Aed-Chr10 14887820 14890987 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1320 - - gmx:100812589 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1320 10 14887820 14890987 Aed2g0148 2 1001187 1004837 ECH
Aed10g1320 10 14887820 14890987 Aed1g1485 1 13443168 13447638 ECH
Aed10g1320 10 14887820 14890987 Aed10g1320 10 14887820 14890987 ECH