Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1267 ATGGTGTCTCCGAAGCAGCTCCTAGGCACCATCGAATCTGCGCTTCTCGGCCCTTCGCCTCCGACGGCGGCGCAACGCGTCGAACTCTTGCACGCTCTTCGCACTTCTCTCCCCTCCTTTCAGTCCCTTCTCTCATATCCCCCCCCAAAGCCATCTGATCGAAGTCAAGTTCAGTCAAAGTCAATTAGGCTTCCTGATTCTCCTCCTATTTCACTGGACGACCAGGATGCGCACATTGCTCTCAAATTGAGTGACGATCTCCATCTCAATGAAGTTGATTGTGTTCGTTTGCTTGTATCAGCGAATCAAGAGTGGGGCTTAATGGGAAGGGAACCACTGGAAATTTTACGGCTTGCAGCGGGACTCTGGTATACAGAGAGAAGAGATTTGATAACATCCCTCCATTTGCTCTTAAGGGCTGTGGTGCTAGATCAGGGACTGCAAGATGATGTATTGGTAGACATTCAGAAGTATCTGGAAGATCTTATCAGTTCTGGACTTAGACAGCGGTTGATTTCTCTTATCAAGGAACTCAATAGAGAAGAACCTTCTGGTTTGGGTGGTCCTCAGTGTGAGCGTTATGTTCTTGATTCAAGAGGTTCTCTTGTGGAGAGGCAGGCAGTGATCTCTAGAGAAAGACTTATTCTGGGACATTGTCTTGTCCTTTCGATTCTAGTTGTCCGGACAAGTCCAAAGGATATAAAAGATATTATTTCCGTTTTGAAAGATAGTGCTTCTGAAGTTAGTGAGAGCAATACCACTGTAAAACATCAGATTACCTTTTGCCTTCTATTTGCCCTTGTGATTGCTTTTGTTTCAGATGGTTTGAGTACAGTGCCTGATAAAGCATCTGTCCTTTCTTCCAATGCTTCCTTCAGACACGAATTTCATGAACTTGTAATGACTATTGGGAATGATCCAAATGTTGAGGGCTTTGTTGGTGGCATAAGGCTTGCTTGGGTGGTACATTTGATGTTAATACAAGATGGTGTTCCAACAAGAGAGACTATTTCAAGTGGTTCATCAAATGAACTGGGTTATCTTAGTCAATGCTTGGAAATCATTTTCTCAAATAATGTTTTTCAGTTTTTACTTGATAAAGTTCTTCATACTGCTGCCTTCCAGACTGAAGACGAAGATATGATCTACATGTACAATGCTTATCTGCACAAGCTGATTACGTGCTTCTTGTCTAACTCGCTTGCAAGAGACAAGATAAAAGAATCCAAGGAACGGATTATGAGTGTGCTTAGTCCATACCGAGTTGTTGGATCACATGATTTTTCACAGGACAGTAATTCAAGTTCTCTACATGGCACTGAGATGGGCCATTTGCCATTTAATTCAATCTTGGACTTTGTCAGCGAAATTTATCAGAAAGAACCAGAGCTCTTGTCGGGCAATGATGTGTTGTGGACATTTGTAAATTTTGCTGGAGAGGATCATACGAATTTCCAAACGCTTGTGGCATTCTTGAATATGCTGAGCACCTTGGCTTGTAGTCAAGAAGGTGCTTCAAAGGTTTATGAGTTGCTGCAAGGTAAAGCATTCCGCTCTATTGGATGGAGCACTTTATTTGAATGCTTAACAATTTATGATGAGAAATTCAAACAGTCTCTTCAAACTGCTGGAGCAATGTTGCCTGAAATTCAGGAGGGTGATGCCAAAGCCCTTGTGGCATACTTGAATGTTCTAAAAAAGGTTATAGAAAATGGGAACCCAACAGAAAGAAAAACCTGGTTTCCTGATATTGAACCATTGTTCAAGCTTCTTAGTTATGAAAATGTACCCCCTTATCTTAAGGGTGCTCTAAGGAATGCAATAGCCACATTTATTCAGGTCTCTCCAGTGCTGAAGGATAGCATCTGGACCTATCTTGAGCAATATGATTTGCCAGTGGTTGTTGGGCCTGATATCCAGAACAGTCCACAATCTATGGGTACTCAGGTTTATGATATGCAATTTGAACTGAATGAGATTGAAGCAAGGAGAGAACAATATCCTTCAACTATATCTTTCCTTAATTTGATAAATGCTCTTATTGCAGAAGAACGAGATTTGTCTGATAGAGGGCGAAGATTTATTGGAATCTTTAGGTTCATCTATGATCATGTTTTTGGGCCATTTCCTCAGAGAGCCTATGCGGATCCCTGTGAAAAATGGCAGTTGGTTGGTGCATGCCTTAAACATTTTCACATGGTATTGAGTATGTATGACATCAAGGATGAGGACCATGAGGGTGTAGTTGATCAGTCACGACTTTCAGCAACTAAAGAATTATCACCACTTCAGACACAGCTCCCGGTTTTAGAGTTGCTGAAAGATTTCATGAGTGGAAAAACTGCCTTTCGGAACATAATGAGTATTCTTCTGCCAGGGGTGAATTCCCCATTGGATATTATACTCTCCCATGATCATAATCAAATAGTGGCCCTGTTGGAGTATGTCAGATATGATTTTCAGCCAAAAGTTCAGCAATCCTCCATCAAAATCATGAGTATTTTAAGCTCTCGCATGGTTGGACTTGTTCAACTATTGCTAAAATCTAATGCTTCAAACAGCTTGATAGAAGATTATGCAGCCTGCCTTGAATTACGGTCAGAAGAGTTTCAGAATCTTGAAAATAACAGTGATGATCCAGGCATTCTTATTATGCAACTTCTAATTGACAATATCAGCCGGCCAGCTCCTAACATCACTCATTTACTACTTAAATTTGATCTAGACACACCTATTGAGCGGACAGTCTTACAGCCTAAATTTTATTACAGTTGCATGAAGGTTATTCTTGATATCCTGGAAAAGCTTTTGAAGGCTGATGTAAATGCATTACTTCATGAATTTGGTTTTCAGCTCCTTTATGAATTGTGCGTAGATCCACTGACATGTGTACCTACAATGGATCTGTTGTCAAATAAAAAGTACCAATTCTTTGTTAAGCACCTTGATACAATTGGTATTGCTCCACTTCCTAAACGAAATAGCAACCAGTCACTTCGTAACAGTTCCCTTCATCAGAGAGCGTGGCTGTTGAAACTTTTAGCAGTTGAACTACATGCTGGTGATGTTAGGAGCTCCAATCATAGAGAAGCATGTCAGACAATCCTTTCTTATCTTTTTGCCCACGGTATTAATGACATTGGTGGGGGCCAGGCCATGTCTCCATTTTTGCTTCATGATACTTCAGAAAATGCTGCTATACGAACTGTCAGCAAGAATAAGGTATTAGAATTGCTTGAAATCATCCAGTTTAGATGTCCAGATTCCACTACTCAGCTCTCAAATATTGTGGCTGGGATGAAATATGACTTGCCGGCAGAAGACATTCTTGGAAATCCGGGAAATTCTGGAAAGGGTGGTGTCTACTATTATTCTGAGAGAGGTGACAGGCTAATTGACCTTGCTTCTTTCCATGACAAACTTTGGCAGAAATATAATTCAGCATATGCCCAGGCAACTAACCTTGGCAGTGAAGTTGAACTGAATAATGTACGTGAGACAATTCAGCAGTTGCTGAGATGGGGGTGGAAATACAATAAAAATCTTGAGGAGCAAGCTGCACAACTTCATATGTTGACTGCCTGGTCTCAGATTGTTGAGGTGTCTGTTTCTAGAAGATTAACAATGCTTGAAGATCGATCTGAAATTCTTTTTCAGGTCCTTGATGCGTCTCTTAGTGCATCTGCTTCTCCTGACTGTTCATTGAGGATGGCATTCATACTATCACAGGTAGCATTGACCTGCATGGCTAAGCTGCGAGATGAAAGATTTTTGTTCCCTGGCAGTCTGAGTTCTGATAATATCACATGCCTTGATCTCATTGTGGTGAAGCAATTATCAAATGGAGCTTGTCTAACCATATTGTTTAAGCTTATCATGGCAATTCTTAGAAATGAATCTTCAGAAGCTCTTAGGAGACGTCAATATGCTCTCCTTCTTAGCTATTTCCAGTATTGCCAAAATGTGGTTGATCCTGATGTTCCAACCACAGTTCTTCAATTCTTGCTTCTCAATGAACAAGATAATGAATATATTGATCTCCCAAAGATTGACAAAGAACAGGCAGAACTGGCTCGTGCAAACTTTTCAACTTTTAGGAAAGAAGCTCAGAGCATTTTGAATTTGGTCATAAAAGATGCAACCCATGGTAGTGAACCTGGAAAGACAATATCACTTTATGTTCTTGATGTGTTGATTAGTATAGATCATGAGCGCTATTTCTTGAGCCAACTTCAAAGCAGGGGGTTTTTAAGGTCTTGCTTTACAGCCATAAGCAATGTTTGCAATCAGGTAAAGAAACTGCAGGGAAGTTTAAGGTGGGTTGAGACTAGACTTAGAAGAGATATGGCTGTGGATGTTGATAGACAACGAATGATTATAACTCCGGTCTTGAGATTAGTGTTTTCACTAACTTCCTTGGTTGATACATCTGACTTTTTGGAGGTGAAGAATAAAATTGTCCGTGAAGTAATAGATTTTATCAGAGGGCATCAATCACTCTTTGATCAAGTTCTCCGTTTAGACATTGCTGAAGCAGATGAATTGAGAATCGAGCAGATCAATTTAGTTGTTGGTATTCTTAGCAAGGTTTGGCCATATGAAGAGAGTGATGAGTACGGTTTTGTGCAAGGGCTTTTTGGTATGATGCATGCTCTTTTCTCACGTGATTCAAAGATTCCTAATTTTGCTCAATCAAGAGTATCACCTGAGAATCAGAGGAATTCAGAACTACAGATGTTTAATTTGTGCTACAGCCTGAGCTCTTACTTATATTTTTTAGTCACAAAGAAAACCCTGAGATTACAGTTAATTTTTTTTATGCTGTCGCAGCCTTCAGATGCCTCCTCCAGTTACCCTTCTTCTGTTGAACTTCAACAACCCACATTGAGCTTGCTTAATTCTCTTCTTTCTTCTGTTACCACTGCTCTTGAAAGGGCTGCTGAGGAAAAATCCTTGTTACTGAATAAGATTCGAGACATAAATGAACTGTCAAGGCAGGAAGTGGATGAAATCATCAATATGTGTGTCCGGCAAGACTCTGTTTCATCTTCAGATAACATACACAAAAGGAGATACATTGCAATGGTAGAAATGTGCCGAGTTGTTGCTAGTAGGGATCAGCTAATCATTTTATTACTCCCACTCTCTGAACATGTGCTAAATATCATCCTTATCCATCTTCAAGAGAGCTCTGTTGCACTTGATTCTACCTTGACTACAAAAACAATTACATATGGCGCAAAGCATGATGCACAGCAAGACGTTGCTTTGTTATGTGGAAAATTAGTTCCAACCCTTGAGCGACTGGAGTTGCTGAGTGAGGAGAAAGTAGGGCACAATCTCAAAGTGTTCCGCAGATTAGCAACTTCTGCCAAAGAGCTTGCAATTCAAAAAATGATTTTGTAG 5406 0.4042 MVSPKQLLGTIESALLGPSPPTAAQRVELLHALRTSLPSFQSLLSYPPPKPSDRSQVQSKSIRLPDSPPISLDDQDAHIALKLSDDLHLNEVDCVRLLVSANQEWGLMGREPLEILRLAAGLWYTERRDLITSLHLLLRAVVLDQGLQDDVLVDIQKYLEDLISSGLRQRLISLIKELNREEPSGLGGPQCERYVLDSRGSLVERQAVISRERLILGHCLVLSILVVRTSPKDIKDIISVLKDSASEVSESNTTVKHQITFCLLFALVIAFVSDGLSTVPDKASVLSSNASFRHEFHELVMTIGNDPNVEGFVGGIRLAWVVHLMLIQDGVPTRETISSGSSNELGYLSQCLEIIFSNNVFQFLLDKVLHTAAFQTEDEDMIYMYNAYLHKLITCFLSNSLARDKIKESKERIMSVLSPYRVVGSHDFSQDSNSSSLHGTEMGHLPFNSILDFVSEIYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLACSQEGASKVYELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNVLKKVIENGNPTERKTWFPDIEPLFKLLSYENVPPYLKGALRNAIATFIQVSPVLKDSIWTYLEQYDLPVVVGPDIQNSPQSMGTQVYDMQFELNEIEARREQYPSTISFLNLINALIAEERDLSDRGRRFIGIFRFIYDHVFGPFPQRAYADPCEKWQLVGACLKHFHMVLSMYDIKDEDHEGVVDQSRLSATKELSPLQTQLPVLELLKDFMSGKTAFRNIMSILLPGVNSPLDIILSHDHNQIVALLEYVRYDFQPKVQQSSIKIMSILSSRMVGLVQLLLKSNASNSLIEDYAACLELRSEEFQNLENNSDDPGILIMQLLIDNISRPAPNITHLLLKFDLDTPIERTVLQPKFYYSCMKVILDILEKLLKADVNALLHEFGFQLLYELCVDPLTCVPTMDLLSNKKYQFFVKHLDTIGIAPLPKRNSNQSLRNSSLHQRAWLLKLLAVELHAGDVRSSNHREACQTILSYLFAHGINDIGGGQAMSPFLLHDTSENAAIRTVSKNKVLELLEIIQFRCPDSTTQLSNIVAGMKYDLPAEDILGNPGNSGKGGVYYYSERGDRLIDLASFHDKLWQKYNSAYAQATNLGSEVELNNVRETIQQLLRWGWKYNKNLEEQAAQLHMLTAWSQIVEVSVSRRLTMLEDRSEILFQVLDASLSASASPDCSLRMAFILSQVALTCMAKLRDERFLFPGSLSSDNITCLDLIVVKQLSNGACLTILFKLIMAILRNESSEALRRRQYALLLSYFQYCQNVVDPDVPTTVLQFLLLNEQDNEYIDLPKIDKEQAELARANFSTFRKEAQSILNLVIKDATHGSEPGKTISLYVLDVLISIDHERYFLSQLQSRGFLRSCFTAISNVCNQVKKLQGSLRWVETRLRRDMAVDVDRQRMIITPVLRLVFSLTSLVDTSDFLEVKNKIVREVIDFIRGHQSLFDQVLRLDIAEADELRIEQINLVVGILSKVWPYEESDEYGFVQGLFGMMHALFSRDSKIPNFAQSRVSPENQRNSELQMFNLCYSLSSYLYFLVTKKTLRLQLIFFMLSQPSDASSSYPSSVELQQPTLSLLNSLLSSVTTALERAAEEKSLLLNKIRDINELSRQEVDEIINMCVRQDSVSSSDNIHKRRYIAMVEMCRVVASRDQLIILLLPLSEHVLNIILIHLQESSVALDSTLTTKTITYGAKHDAQQDVALLCGKLVPTLERLELLSEEKVGHNLKVFRRLATSAKELAIQKMIL 1801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1267 1801 MobiDBLite consensus disorder prediction 43 68 - -
Aed10g1267 1801 Coils Coil 1643 1663 - -
Aed10g1267 1801 MobiDBLite consensus disorder prediction 43 65 - -
Aed10g1267 1801 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 25 748 IPR021827 GO:0005643
Aed10g1267 1801 Pfam Nuclear pore complex scaffold, nucleoporins 186/192/205 768 1433 IPR021827 GO:0005643
Aed10g1267 1801 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1600 IPR021827 GO:0005643
Aed10g1267 1801 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 11 1600 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1267 K14310 - gmx:100777616 3226.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1267 10 13084332 13105501 Aed10g1267 10 13084332 13105501 ECH