Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1220 ATGGCCACCTCCAACCTCTCCCACCAAGCTTCACGGCCGTTCCCCACAGCGTGCATCAGCTCCCGGCCACCGAGCACCACCGTGAGCCTCCGGCGGCACCCCCCACCTCCTCCCAAGAAGCGGTCGAAGTGGGCCATTAAACTGAGCCCAGTGGAGCAAAGCCCACAAAAAGCAACGTTCGACATGCAGCAACTGGTGGGCTTTCTCTACGAGGATCTCATCCACCTCTTCGACGACCAAGGTATCGATGAAACGGCCTACGACGAACGTGTCTTCTTTCGCGACCCTATCACTAAACACGACACTTTGAGACCTTATGAGATAACTACAAGGTGGACCATGGTTATGAAATTCTTGTTACTTCCGTGGAAACCGGAACTGATCTTTACAGGAACTTCCGTTATGGGCATTAACCCAGAAAATGGCAAGTTTTGTAGCCACGTGGACTTTTGGGATTCTATAGAGAAAAATGACTATTTTTCTTTTGAAGGTTTGTTGGATGTATTCAAACAGTTGAGGATTTACAAGACACCAGAATTGGAATCACCCAAATATCAAACATTGAAAAGGACAGCAAATTATGAGGTTAGACAGTATGATCCTTTCATAGTAGTAGAAACAAATGGAGACAAGCTATCTGGGTCTACTGGCTTCAATGATGTTGCTGGATATATATTTGGAAAGAATTCCACAACGGAGAAGATTCCAATGACTACTCCCGTGTTCACTCAAGCCAATGATGCTGACCTGTCCAAAGTGTCAATCCAAATAGTTCTTCCATTAGACAAAGAAACAGAAAGTTTACCAAATCCTAATCAAGAAACAGTTCGATTGAGAAAGGTTGAAGGAGGCATTGCTGCAGTAATGAAGTTCAGTGGAAAGCCCACAGAGGATATTGTTCGTGAAAAAGAGAAAATCCTGCGCTCCAACATCATTAAAGATGGTCTTAAACCTCAGCTTGGTTGTTTGCTTGCACGGTACAATGATCCAGGTCGAACATGGACCTTTATAATGGTATGCTACAAAACCTGCTTGAGTGTCAGTTGA 1047 0.4489 MATSNLSHQASRPFPTACISSRPPSTTVSLRRHPPPPPKKRSKWAIKLSPVEQSPQKATFDMQQLVGFLYEDLIHLFDDQGIDETAYDERVFFRDPITKHDTLRPYEITTRWTMVMKFLLLPWKPELIFTGTSVMGINPENGKFCSHVDFWDSIEKNDYFSFEGLLDVFKQLRIYKTPELESPKYQTLKRTANYEVRQYDPFIVVETNGDKLSGSTGFNDVAGYIFGKNSTTEKIPMTTPVFTQANDADLSKVSIQIVLPLDKETESLPNPNQETVRLRKVEGGIAAVMKFSGKPTEDIVREKEKILRSNIIKDGLKPQLGCLLARYNDPGRTWTFIMVCYKTCLSVS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1220 348 Pfam SOUL heme-binding protein 180 331 IPR006917 -
Aed10g1220 348 SUPERFAMILY Probable bacterial effector-binding domain 171 333 IPR011256 -
Aed10g1220 348 Pfam Uncharacterized conserved protein (DUF2358) 105 147 IPR018790 -
Aed10g1220 348 PANTHER SOUL HEME-BINDING FAMILY PROTEIN 47 339 - -
Aed10g1220 348 MobiDBLite consensus disorder prediction 1 43 - -
Aed10g1220 348 MobiDBLite consensus disorder prediction 1 28 - -
Aed10g1220 348 Gene3D Regulatory factor, effector binding domain 179 338 IPR011256 -
Aed10g1220 348 PANTHER HEME-BINDING PROTEIN-RELATED 47 339 IPR006917 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1220 - - gmx:100789568 611.683