Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1203 ATGTTAAAGCAAATTCTTAGCAAATTGCCTAAGAAGGTGCTGCCGAAATCTGACACATCTGATTCAGCACAGAGTGATTTTGGGAGTATTACTACTTTTGGAAATGTCTTTCAATGTACAAATGTTGGGGTTGCCATTTCAAGCAAATTTAATGCTGTGAAGCGGGTATCATCAGTTGTATTTCCAGCAAGCATGAGTTTTGGAGTGGAAGCGGTTGATCCCCATATATCTTTCAAAGATGTTTCAAATGCACAGAAGCAAAACCTGTTTATTAGTAAGTTGAATTTTTGCTGCGGTGTTTATGATACGAGTGGTCCTGATAAGAACTGCACAGAGCAAAATGTTAAACATCAAACATTGGTAGAGCTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTCACAGAACCAGCAATAGCTGCAATGTGTAAAATGTGTGCAAGTAATTTGTTCAGGGCTTTCCCACCTAGGTTTCGTCCTAGTGCTACTAGTGGGGAAACAGAAGATGAAGAGCTTATGTTCGATCCTGCCTGGTCAAACCTGCAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATAATTCACTTGATCTAAAGGTGGCAAAAATGCATCTTGATCACACTTTCATTGTAAGATTGCTTGACCTTTTTGATTCCGAGGACCCTAGAGAAAGAGATTGCCTGAAAACAGTTCTACATAGAATCTATGGGAAATTCATGGTACACAGGCCTTTCTTACGGAAATGTGTCAACAATATCATCTACCTTTTTGTTTTTGAGACGGAACGTCATAATGGAATTGCTGAGCTGTTGGAGATTTTTGGGAGTGTGATTTGTGGGTTCGCCTTGCCATTGAAAGAGGAGCACAAAATGTTTTTGTGTAAAGCTTTATTACCTTTACACAAACCTAAATCTGTTGGTATTTATCATCAGCAGTTAACATATTGTGTTGTGCAGTTCATTGATAAGGATCCAACACTGGCTAGCACTGTGATAATGGGACTATTGAAGTACTGGCCAGTAACAAATAGCCAAAAGGAGCTAATGTTCATAAGTGAGTTGGAAGAGGTTTTGGACGTGACAATCATGTCTGAATTTCAGAAGGTTATGGTCCCATTGTTTCGACGCATAGCTTGCTGTCTTAATAGCTATCATTACCAGGTGGCTGAGCGAGCTCATTTGCTATGGAACAACGAGCACATCCTTGATGTTGTCACCCAGAACCGGCAGGTGATTCTGCCTCTTGTCTTCTCAGCGCTTGTACATAACACCCAAAATCACTGGAACCGAACGGTGCTCAACCAGACTGAGAACATGAGGAAGATGCTGTCTCAGATGGACGAGGAGCTGGTGCTCACCTGCCAACGCAAGTTGGAGGAGGAAGATTCAAGGTCGAGCGCCGCAGCCGAGCAGCGAAGAATAACATGGGAACGCCTTGAAGCGGCCGCCAACGTCCAACAACACATGGCCATAGGTGGCGAGGTTTTAGCATCACCCGCATGTTCCGTGGCATGCTAG 1521 0.4234 MLKQILSKLPKKVLPKSDTSDSAQSDFGSITTFGNVFQCTNVGVAISSKFNAVKRVSSVVFPASMSFGVEAVDPHISFKDVSNAQKQNLFISKLNFCCGVYDTSGPDKNCTEQNVKHQTLVELVDFVSSGSAKFTEPAIAAMCKMCASNLFRAFPPRFRPSATSGETEDEELMFDPAWSNLQIVYDLLLQFINYNSLDLKVAKMHLDHTFIVRLLDLFDSEDPRERDCLKTVLHRIYGKFMVHRPFLRKCVNNIIYLFVFETERHNGIAELLEIFGSVICGFALPLKEEHKMFLCKALLPLHKPKSVGIYHQQLTYCVVQFIDKDPTLASTVIMGLLKYWPVTNSQKELMFISELEEVLDVTIMSEFQKVMVPLFRRIACCLNSYHYQVAERAHLLWNNEHILDVVTQNRQVILPLVFSALVHNTQNHWNRTVLNQTENMRKMLSQMDEELVLTCQRKLEEEDSRSSAAAEQRRITWERLEAAANVQQHMAIGGEVLASPACSVAC 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1203 506 PIRSF PP2A_B56 7 497 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed10g1203 506 SUPERFAMILY ARM repeat 87 465 IPR016024 -
Aed10g1203 506 Gene3D - 83 483 IPR011989 -
Aed10g1203 506 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 498 - -
Aed10g1203 506 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 77 484 IPR002554 GO:0000159|GO:0007165|GO:0019888
Aed10g1203 506 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 498 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1203 Aed-Chr10 11616630 11620615 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1203 K11584 - gmx:100786778 805.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1203 10 11616630 11620615 Aed10g1203 10 11616630 11620615 ECH