Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1200 ATGGTTGTAACGGCCGCTACGGCGTCGTTTCTCCTCGTGCCTTCGCCGGACGCTGGAAAAGGGAAACCCAAGAAACTGGGTGGTGGCGGTGGTTCTTCCGTGAACCTCGGAGGAGGAGGACTCAAACAGAAACAAGGTTTGTGCGGTGGCTTACAGGTCAAGGCAAACGCGCAAGCGCCTCCGAAGACCGCAGTGAAGGTCGAGGATGATCTGTCGTTGTCGTCATCGTCGTTTTCGCATGCCCCGAGGACTTTCATAAACCAGCTGCCTGATTGGAGCATGCTTCTGGCCGCCATCACCACGGTGTTCCTAGCGGCGGAGAAGCAGTGGATGATGCTGGATTGGAAGCCGCGGCGGCCCGACATGCTCATTGACCCCTTTGGGATTGGGAAGATCGTGCAGGACGGGCTCGTGTTCAGGCAGAATTTTCCCATTAGGTCCTATGAAATCGGTGCGGACAAAACCGCGTCTATAGAGACGTTAATGAATCATTTGCAGGAGACTGCACTAAATCATGTTAAGACAGCTGGGCTTCTTGGTGATGGTTTTGGTTCCACGCCTGAAATGTGCAAGAAGAATCTGATATGGGTGGTGACTAAGATGCAGGTTGTGGTTGATAAGTATCCTACATGGGATGATGTTGTTCAAGTAGACACTTGGGTTTCTGCATCAGGGAAGAATGGTATGCGTCGTGATTGGCTTGTGAGTGATGCCAAAACTGGTCAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAGATTATCTAAAATGCCCGAAGAAGTCAGAGCAGAGATAGGCTCTTATTTTGTGGACATTGCTCCAGTTGTGCCTGAGGATAACAGAAAACTAACCAAACTTGATGATTCAGCTAATTTCATTCGCTCTGGTTTAAGTCCCAGATGGAATGATCTAGATGTTAATCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTCTGGAGAGCCATGAGCTCTGTGGCATGACACTGGAATACAGGAGGGAGTGTGGCAGGAACAGCGTGCTGGATTCCCTCTCCGATATCTCTGGCGCCGATGTAGGAAACTTAGCAGACGGCGGATTCTTCGAGTGCAAGCACTTGCTTCGACTTGTTGAAGATGGCGGCGAGATTGTGAGGGGTAGAACTGAATGGAGGCCAAAACCTTTAAACAGCAACTTTGGCAATGTTTTGAGTCATGTTCCAGCACAAAGCAGCAGCAGCACCTGA 1272 0.4976 MVVTAATASFLLVPSPDAGKGKPKKLGGGGGSSVNLGGGGLKQKQGLCGGLQVKANAQAPPKTAVKVEDDLSLSSSSFSHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLIDPFGIGKIVQDGLVFRQNFPIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDKYPTWDDVVQVDTWVSASGKNGMRRDWLVSDAKTGQILTRASSVWVMMNKVTRRLSKMPEEVRAEIGSYFVDIAPVVPEDNRKLTKLDDSANFIRSGLSPRWNDLDVNQHVNNVKYIGWILESAPQPLLESHELCGMTLEYRRECGRNSVLDSLSDISGADVGNLADGGFFECKHLLRLVEDGGEIVRGRTEWRPKPLNSNFGNVLSHVPAQSSSST 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1200 423 CDD 4HBT 139 255 - -
Aed10g1200 423 PANTHER PALMITOYL-ACYL CARRIER PROTEIN THIOESTERASE, CHLOROPLASTIC 1 405 - -
Aed10g1200 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 298 411 IPR029069 -
Aed10g1200 423 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 133 281 IPR029069 -
Aed10g1200 423 Pfam Acyl-ACP thioesterase 136 400 IPR002864 GO:0006633|GO:0016790
Aed10g1200 423 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 405 IPR045023 GO:0006633|GO:0016297
Aed10g1200 423 Pfam Acyl-ATP thioesterase 1 125 IPR021113 GO:0016790
Aed10g1200 423 Gene3D Hotdog Thioesterase 129 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1200 Aed-Chr10 11594226 11600474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1200 21 409 Acyl Lipid Metabolism Gene Families AT1G08510 70.781 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1200 K10781 - gmx:100797796 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1200 10 11594226 11600474 Aed10g1200 10 11594226 11600474 ECH