Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1197 ATGATTCAATATCGCGTACAAGTGACACTCTTTCTCGTGTTCTTAACTGTGACTTTCGGTAGCCATGCCTGGGTTGGTGTGAACTGGGGAACCATGGCGACCCACCAGCTTCCACCGGAGAAGGTGGTGAGGATGCTGAGGGAAAACGGGTTTAAAAAACTGAAGCTTTTTGATGCAGATGAGTTCATTATGGCTGCACTGATGGGGTCTGATATCGAAGTCATGGTGGCAATACCCAACGTGATGCTGGACAAGATAAGTAACAGTCCCAAAGCTGCAGATTCTTGGGTCAAGGAAAATGTCACCAGTTACTTGTTCACTGGTGGTGTCAAAATCAAGTATGTTGCTGTGGGTAATGAGCCTTTCCTCAAAGCATACAATGGCTCCTTTGCAAAGAAAACCCTGCCAGCCCTCAAGAACATACAGGAATCACTCAACAAGGCCGGAATGGGTTCGAAGATCAAAATCACAGTTCCATTCAATGCTGACATTTACTACTCACCAGACTCAAATCCGGTGCCATCGGCCGGTGACTTCAGGCTGGAAATAAGAGACCTCACAGTTGAAATCATCCAATTCCTATATGCAAACAATGCACCTTTCACAGTGAACATCTACCCTTTCCTAAGTCTCTATTTCAGCGAAAATTTCCCTTTGGACTTTGCATTCTTTGATGGAAACAACAGCAATCCTCTAAGGGATGGCAAGGCACTCTACACCAACGTGTTTGATGCAAACCTTGATACCCTTCTGTGGGCTTTGGAGAAGGCAGGGTACCCTGACATGAAGGTCGTCATCGGAGAAATCGGCTGGCCGACCGACGGAGACAAGAATGCTAATGCCAAGTATGCAAAAAGATTCAACTTTGGTTTGCTCAAACATGCCCTTAGTGGAAAGGGCACCCCTAAAAGAAAAGGCTCAATTGATTTCTTTCTATTCAGCCTCTTTGATGAGGACACAAAAAGCATTGCTCCAGGGAACTTTGAGAGGCATTGGGGGGTTTTCGAGTTTGATGGAAAGCCAAAGTATGAACTAGACCTAACAGGTCAACACAAAGAAAAGGGTCTTGTTCCTGTGGAAGGTATCAAGTACATGGAAAAAAGATGGTGTGTTTTGGATCCTGAAGTTACCAACTTTGATGATTTGGTTGGTAGCATTGACTATGCTTGCACTTTTTCTGATTGCACTTCACTTGGCTATGGCTCTAGTTGTAATCATCTCAGTGTTCGAGGGAATGCTTCTTATGCCTTCAATATGTACTATCAAGTGAACAACCAAGAGAGATGGGACTGTGATTTCAATGGCTTTGCTGTCATAACACATAAGGATCCATCACAAAATGGATGTCAGTTCCCTTTGATGATCTCTGGTGGTGGTTCTTTGCTGCTGCTTGGAGGGATTTCTGATATCCTTAAGATAGCACTTAGGGTGTGTGTTTTTGTTGTCATGTTTTTGCCATAG 1461 0.4422 MIQYRVQVTLFLVFLTVTFGSHAWVGVNWGTMATHQLPPEKVVRMLRENGFKKLKLFDADEFIMAALMGSDIEVMVAIPNVMLDKISNSPKAADSWVKENVTSYLFTGGVKIKYVAVGNEPFLKAYNGSFAKKTLPALKNIQESLNKAGMGSKIKITVPFNADIYYSPDSNPVPSAGDFRLEIRDLTVEIIQFLYANNAPFTVNIYPFLSLYFSENFPLDFAFFDGNNSNPLRDGKALYTNVFDANLDTLLWALEKAGYPDMKVVIGEIGWPTDGDKNANAKYAKRFNFGLLKHALSGKGTPKRKGSIDFFLFSLFDEDTKSIAPGNFERHWGVFEFDGKPKYELDLTGQHKEKGLVPVEGIKYMEKRWCVLDPEVTNFDDLVGSIDYACTFSDCTSLGYGSSCNHLSVRGNASYAFNMYYQVNNQERWDCDFNGFAVITHKDPSQNGCQFPLMISGGGSLLLLGGISDILKIALRVCVFVVMFLP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1197 486 Pfam X8 domain 369 437 IPR012946 -
Aed10g1197 486 SMART X8_cls 368 451 IPR012946 -
Aed10g1197 486 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 6 475 - -
Aed10g1197 486 SUPERFAMILY (Trans)glycosidases 25 345 IPR017853 -
Aed10g1197 486 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 6 475 IPR044965 GO:0004553|GO:0005975
Aed10g1197 486 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Aed10g1197 486 Gene3D - 363 453 - -
Aed10g1197 486 Pfam Glycosyl hydrolases family 17 25 346 IPR000490 GO:0004553|GO:0005975
Aed10g1197 486 Gene3D Glycosidases 24 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1197 Aed-Chr10 11549329 11551280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1197 25 455 Miscellaneous Gene Families AT2G19440 58.469 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1197 - - gmx:100781894 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1197 10 11549329 11551280 Aed10g1197 10 11549329 11551280 ECH