Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1193 ATGGTCGATCACTACAACAAGCTGGTAAAACTAGCTGCGAGGGCTTTCTACGATGATCTAACGAGTAAAGGAGAGAATCAACTCAAATCGGGAAGGAGTGATAACAGAGGAATCGCTGTGGTGATTCTGGATGCTCTCACGAGGCGACAATGGGTCCGAGAAGAAGACTTGGCAAAAGATCTCAAATTACATACAAAACAACTTCGCCGAACACTCCGGTTTTTTGAAGAGGAGAAGATCATTACTCGAGAATATAGGAGAGAGACAGCCAAAGGAGCAAAACTGTATAGTGCTGCTACAGCTGCTACAGTTGATGTTCAACTGACTGGAAAAGAGGGAGAAGAAAAGGTCAAGTTGCACACGCACTCTTATTGTTGTCTAGATTATGCCCAGATATATGATGTGGTCAGGTACAGAATACATCGCATGAAGAAGCTGCTGAAAGATGAATTGGACAACAAGAACACAATTGAGGAATATATCTGTACAAAATGTGGAAAAAGATATAATGCGCTGGATGCATTGCGATTAGTATCTTTTGAAGATGATGACTTCCATTGTGAAAGTTGTAATGGAAAACTTGAGGTAGAAAGTGACAAATTTGTTGCTCAAGAAGGAGGTGATGGAGATGAAAATGCAAGAAGACGGCGGCATGAAAAGTTAAAAGACATGCTTCAGAAGATGGAGGCACAACTCAAGCCTTTAATGGACCAACTCAGCCGGGTGAAAGATTTACCTGTTCCAGAATTTGGCAGTCTTCTAGCGTGGGAAGCTCGAGCTAGTGCTATGGGGCGTGCAGCAGATCTTGCTGGTGATTCTAAAAATTCTCAGCTTGGATATAATGGAGCACCAATGCCTTATAGTGGAGATACTAAGGTTGTGGTGGACTTCAATGGGACTGAAGGAATGAAGGATATTAAGTCTGAAACTCAAAGTTCATCTCTAAAGGTTTTGCCACCATGGATGATTAAACCTGGGATGGTTCTTACAAAGGAACAACGTGGAGAGGTGAAGGAGGAAATGAAGATGGATGGGACTTCAACTTCCACATCAGCACAGTACTTGGACGACAAGAAATCATCAGATGAGTATATTAAGGCTTATTATGCTGCTTTAGTTAAACAACAACATGAATTGGAAACTGCTGGTAAACAAGACTTGCCAAATACACTCACTGCAAATGATCCTTCTAGCAGTGCTTCTAAACGTCAAGTTGGCACGAAATCAAAACTTGAGGAAGATGATGATGGTACTGAATGGGAGGAGGCTCCAGTTGCAGGTACTGGAAATGAAAATTACAAGGTGGATTTGAATGTTCATGCTGATGATGCTCCAGCTGATGACGATGAAGAAGATGTGGACTGGGAAGAAGGTTGA 1377 0.4212 MVDHYNKLVKLAARAFYDDLTSKGENQLKSGRSDNRGIAVVILDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKLYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESDKFVAQEGGDGDENARRRRHEKLKDMLQKMEAQLKPLMDQLSRVKDLPVPEFGSLLAWEARASAMGRAADLAGDSKNSQLGYNGAPMPYSGDTKVVVDFNGTEGMKDIKSETQSSSLKVLPPWMIKPGMVLTKEQRGEVKEEMKMDGTSTSTSAQYLDDKKSSDEYIKAYYAALVKQQHELETAGKQDLPNTLTANDPSSSASKRQVGTKSKLEEDDDGTEWEEAPVAGTGNENYKVDLNVHADDAPADDDEEDVDWEEG 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1193 458 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 206 IPR013083 -
Aed10g1193 458 Coils Coil 218 238 - -
Aed10g1193 458 ProSiteProfiles TFE/IIEalpha-type HTH domain profile. 5 137 IPR017919 -
Aed10g1193 458 MobiDBLite consensus disorder prediction 382 458 - -
Aed10g1193 458 Pfam TFIIE alpha subunit 39 153 IPR024550 -
Aed10g1193 458 Coils Coil 58 78 - -
Aed10g1193 458 MobiDBLite consensus disorder prediction 382 405 - -
Aed10g1193 458 MobiDBLite consensus disorder prediction 335 355 - -
Aed10g1193 458 MobiDBLite consensus disorder prediction 443 458 - -
Aed10g1193 458 SMART tfiie3 37 208 IPR002853 GO:0006367
Aed10g1193 458 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT 8 438 IPR039997 -
Aed10g1193 458 SUPERFAMILY Zinc beta-ribbon 150 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1193 Aed-Chr10 11444913 11452087 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1193 K03136 - gmx:100779773 820.461