Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1188 ATGCACCCAAAAGCCTCATTTGAAGGACCACATGATAATCAAAGTGAGCTTCATCGTTGTAGCTTCGATTGCTGCACTCAAGATTTCACAGGCAAAATCATGCTCTTCCACCAAGAGAAACGGTACAGTAAAATGTTCAGCGATGGGTCACACTTGGAACATGAGTTTGAAGAGAGGGAAAGTAGCACTGTTAATGCTAATCATATAATACAGAATGAAGAGGAGGAGATTAACTTTGTAGTGTCACAAAAACTGCCAACAGGAGAATTTAAGAACTTGGAGCTGTTAATAGGTGGTGAGAAAATGCATGATGTTACTAAGAAGGAGGTATTGCAGAATTTGGTACAAAATTACAAGCAGAGAGAAGCAAACCTTGAAAGAAAACTTCTTGAATTGAATGGTTTGAGGGAAGAGAAATCAGCCATTGCTCAAATGCAAAAACAATTAGAGGAAAGGACACAAAAAGTGGAGTTTCTTGAAAAAACCATTGCTTCCTTGCAATCAGAGAGTGAAATTATTCGAGGAAAACTAAGAGAGGATCTAATGTCAAAAAAGCAGCTAGATATTGCCAAGAAAATGATAAATGAGATGCAAAGGGAAAAGGGTGTCAATGCAAGCCCTGTGAGGGAGAAGATATTGATGCTTAAACAACAAGTAACTGAGTTTCGGAAGGATAATAATAATAGTTCATGTGGAAATGCTATTATGGGAAATAAGAAACCTGAAGATGTTCAAGACATGGAGGTAGAAGTTTTGGAACTGAAGAGGAGAAACAAAGAGCTTGAATTGGATAAAAGGGAGATTGTGATTGAGTTGGCTACTGCACAAGCAAGAATTAGAACTGAGGAGGAAGTAGAGGCCAGGATAAAAGAAGAAATCACTGGTTTACGACATGTCCATGAAGATCTTTCAGAGCAAGTTGAAACATTGCAGAGAAACAGATTTGACATGGTCGAGGAAGTCGTGTACCAACGGTGGCTTCACACATTGTTGAGGTTTGAAGTGCAGGATCATCAAAGACTAAGTAGAAAGGCCTCAAGAAGAGATAGCAGAAGCAGCCAGAATTTAAGCAAAGAACTGTGTGGGGAAAAGCATGCATCAATATCTGATCTTGAGCTTGAGAGTGTCTCTTCCAATGCCACATTGGATGAGAGTGATGAAATTGAAACTACTACCTTTGCAAGCTCTTCCAGTAGCCAAAGTAGCAGTGGCAGTATGAAAATGAAGAGATGGAGGAAAACCAAAGATTACTCTAACAAAATTTGGTCAAAGGGTAGAAATTTGTTTAGCAAACAGTTTTCAATGTCAATGGTTACATCAGATGTATCTGAGTCAGGGAATAGTGGTAATAGTTCAGTTATGAACCTATCCCAGAATGTGAATAGTACTTCTGAATCATTAGAGAGTCCAATAATTTCAAAAAAGAAGAGAGTCTCCTTCAGTGATTCAGTTAAACTATCTACATATGAAGACATGCCAAAGACAGTTGAGAATGCAATTGATGACAAAGAAACAAGGTCTGAGCAGATTGTGGAGCTGACTTCAAGTGTTGTGAGCTCCACCAACATTGATTCCATTGAAGAAAATGAAGGTGCCAAGAATAATAAAATTGGTCATTCAGATCATGATGTGTATTCAAGGAATAGGTTCGTTTCTAGAAAGGATGAAAGGTTCAAAACTATACTACTAGTGCAGCTGGTAGCATTTTTATTCTCTTCGCTAATCCTGCTAGCATGTTTCAGGATCAAATGA 1752 0.3836 MHPKASFEGPHDNQSELHRCSFDCCTQDFTGKIMLFHQEKRYSKMFSDGSHLEHEFEERESSTVNANHIIQNEEEEINFVVSQKLPTGEFKNLELLIGGEKMHDVTKKEVLQNLVQNYKQREANLERKLLELNGLREEKSAIAQMQKQLEERTQKVEFLEKTIASLQSESEIIRGKLREDLMSKKQLDIAKKMINEMQREKGVNASPVREKILMLKQQVTEFRKDNNNSSCGNAIMGNKKPEDVQDMEVEVLELKRRNKELELDKREIVIELATAQARIRTEEEVEARIKEEITGLRHVHEDLSEQVETLQRNRFDMVEEVVYQRWLHTLLRFEVQDHQRLSRKASRRDSRSSQNLSKELCGEKHASISDLELESVSSNATLDESDEIETTTFASSSSSQSSSGSMKMKRWRKTKDYSNKIWSKGRNLFSKQFSMSMVTSDVSESGNSGNSSVMNLSQNVNSTSESLESPIISKKKRVSFSDSVKLSTYEDMPKTVENAIDDKETRSEQIVELTSSVVSSTNIDSIEENEGAKNNKIGHSDHDVYSRNRFVSRKDERFKTILLVQLVAFLFSSLILLACFRIK 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1188 583 Coils Coil 108 169 - -
Aed10g1188 583 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 47 553 IPR040265 -
Aed10g1188 583 MobiDBLite consensus disorder prediction 342 361 - -
Aed10g1188 583 MobiDBLite consensus disorder prediction 378 411 - -
Aed10g1188 583 Coils Coil 244 320 - -
Aed10g1188 583 MobiDBLite consensus disorder prediction 378 407 - -
Aed10g1188 583 PANTHER PROTEIN CHUP1, CHLOROPLASTIC-LIKE 47 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1188 Aed-Chr10 11363675 11366482 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1188 - - gmx:100795382 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1188 10 11363675 11366482 Aed10g1188 10 11363675 11366482 ECH