Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1180 ATGCCGGTGTCAACTCGGTCCCAGACGACGACGACCACACCGAGCGAGTCGAACCCGGAACACGACGCCTTAAAGGAGAAGATGAAATCGCTTCTCGCGCTGTACGAGCAGCACAAGCAGCAGAAGCAGCGCAGCAAGAACAGCCACCGTTCTTCTCGGGAGAAGAGCGGTGGGACCCGCATTCTCGTCTTCGTTAGGGTTAGGCCGCTGGCGAAGAAGGAGAAGGACGCGGGCTCACGGTGCTGCGTCAGAATCGTCGATCGCCGTGACGTTTACCTAACGGAGTTTGCGTCGGAGAAGGATTACCTCAGGTTGAAGAGGCTCAGGGGTCGCCATTTTGCTTTTGATGCTTCGTTTCCTGATTCGGCTTCTCAGCACGAGGTTTATTCCGCCACAACCTCAGAACTTGTGGAGGCAGTTCTGCAAGGGAGGAATGGGTCAGTTTTCTGTTATGGTGCCACTGGAGCTGGAAAGACTTACACAATGCTTGGTACAGTGGAGAGTCCTGGTGTAATGGTGTTGGCAATTAAGGATTTGTTCAGTAAAATCAGGACGAGAAGTTGTGATGGAAACCATGCGGTTCATCTGTCCTATCTTGAGGTTTATAATGAAACTGTCAGGGATTTACTTTCACCTGGAAGACCTCTGGTTCTCAGAGAAGATAAACAGGGGATTGTTGCAGCAGGTCTTACACAATACCGAGCTTATTCCACTGATGAAGTGATGGCAATGCTTCAACAAGGAAATAAGAACAGAACCACAGAACCAACTCGTGCAAATGAAACATCTTCACGCTCCCATGCAATTTTGCAGGTTGTGGTTGAGTACAGAGTTAGAGATGCTGCAATGAATATTTTTAACAAAATGGGCAAGCTCTCACTGATTGATCTTGCAGGGTCAGAGAGAGCTCTTGCCACAGATCAAAGAACAGTTAGATCTCTTGAGGGTGCCAATATAAACCGATCTCTTCTGGCACTAAGCAGCTGCATTAATGCTCTTGTAGAAGGCAAGAAGCACATACCATACCGAAATTCAAAACTCACTCAACTTCTCAAGGACTCATTAGGAGGATCATGCAACACGATCATGATTGCAAACATAAGCCCAAGTAACCTCTCATTTGGTGAAACTCAGAACACCCTTCATTGGGCTGACAGAGCTAAGGAGATTCGAACAAAGGCAACTAATGCAAATGAGGACTTATTGCTAGTGCCTGAGACAGAAACAGATCAGGCCAAGCTAGTACTTGAGCTGCAAAAGGAGAATCGTGAATTGCGAATGCAGCTAGTGCGACAGAATCAGAAGCTTATGACACTCCAGGCACAGTCTGTGGCCCCCCCAACACCACCTTCAGCTACATCTCTTCTTTCCACTCCTCCAACTTCTGCCCCACCAAGTGAAAAACGAAGGACCAGACCCTCTTTCTTAGCTTCAACTCATTTCATTCCAGAGGCCAAGAACAAGGGAGATGATGTAGCTGTCACAATCAGAACACTTCAACAAAGAGTAAAAGCCTTGGAGGCAGAGCTAGAGAGAGTGAAAAAGGATCACAGCTTGCAACTAAAGCAGAAAGATAATGTCATTCGTGAGCTTTCACAACAGGGTGGGAAAAAAGAGGTTGCAACCAGGGCTAGTCTACGGCCAAAGGAGGCAAACCCTGGAGAATTGAAGAGTCCAAGCCATCGTTTTCAGTCACCAGTACAAACTGCAAAGAAACGAAGCTTTTGGGACATAACTACTGCTAACAGCCCATCATCAATTACCACATTGAATGGGAGAAAAACTAGAAGTCATGTCATTTCTGAATCTACTGCACATCCTTCTATGCTTCTTCAGCCTGGATTTGCTCGAAAAAAGGGCGATATTTAA 1869 0.4687 MPVSTRSQTTTTTPSESNPEHDALKEKMKSLLALYEQHKQQKQRSKNSHRSSREKSGGTRILVFVRVRPLAKKEKDAGSRCCVRIVDRRDVYLTEFASEKDYLRLKRLRGRHFAFDASFPDSASQHEVYSATTSELVEAVLQGRNGSVFCYGATGAGKTYTMLGTVESPGVMVLAIKDLFSKIRTRSCDGNHAVHLSYLEVYNETVRDLLSPGRPLVLREDKQGIVAAGLTQYRAYSTDEVMAMLQQGNKNRTTEPTRANETSSRSHAILQVVVEYRVRDAAMNIFNKMGKLSLIDLAGSERALATDQRTVRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGSCNTIMIANISPSNLSFGETQNTLHWADRAKEIRTKATNANEDLLLVPETETDQAKLVLELQKENRELRMQLVRQNQKLMTLQAQSVAPPTPPSATSLLSTPPTSAPPSEKRRTRPSFLASTHFIPEAKNKGDDVAVTIRTLQQRVKALEAELERVKKDHSLQLKQKDNVIRELSQQGGKKEVATRASLRPKEANPGELKSPSHRFQSPVQTAKKRSFWDITTANSPSSITTLNGRKTRSHVISESTAHPSMLLQPGFARKKGDI 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1180 622 PANTHER KINESIN-LIKE PROTEIN 40 615 - -
Aed10g1180 622 MobiDBLite consensus disorder prediction 441 472 - -
Aed10g1180 622 SMART kinesin_4 58 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 MobiDBLite consensus disorder prediction 1 18 - -
Aed10g1180 622 Pfam Kinesin motor domain 66 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 MobiDBLite consensus disorder prediction 1 56 - -
Aed10g1180 622 PANTHER KINESIN-RELATED 40 615 IPR027640 GO:0003777|GO:0007018
Aed10g1180 622 ProSitePatterns Kinesin motor domain signature. 290 301 IPR019821 GO:0003777|GO:0005524|GO:0007018
Aed10g1180 622 ProSiteProfiles Kinesin motor domain profile. 60 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 435 IPR027417 -
Aed10g1180 622 MobiDBLite consensus disorder prediction 531 571 - -
Aed10g1180 622 Gene3D Kinesin motor domain 30 397 IPR036961 -
Aed10g1180 622 MobiDBLite consensus disorder prediction 19 33 - -
Aed10g1180 622 PRINTS Kinesin heavy chain signature 257 274 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 PRINTS Kinesin heavy chain signature 143 164 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Aed10g1180 622 Coils Coil 496 534 - -
Aed10g1180 622 Coils Coil 415 442 - -
Aed10g1180 622 Coils Coil 21 48 - -
Aed10g1180 622 MobiDBLite consensus disorder prediction 441 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1180 Aed-Chr10 11257734 11263315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1180 61 429 Miscellaneous Gene Families AT2G21380 36.461 6.36e-57 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1180 K10401 - gmx:100815524 1033.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1180 10 11257734 11263315 Aed10g1180 10 11257734 11263315 ECH