Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1175 ATGGCTTACAAATCGCTGAGTTCTATCACTGTTTCGGATATTGAATCCCATCATGGAATTGCAAGAGAAGACGCTGCCACTCTCCACCAGCGTCTTGCACAAATCATCGAAATTCACGGCGATGGCACCCCCGCCACGTGGCAGCACGTCAGCAGCAGCGTCCTCAACCCTGAACTTCCCTTCTCCTTGCATCAGATGCTGTACTATGGCTGCTACAAGGATTACGGTCCCGACCCACCCGCTTGGATACCCGACCCGGAAAGTGCTGCTTTGACCAATGTTTGGCAGTTGCTAGAGACGAAGGGTGAAGAGTTTCTGGGTTCGGCATATAAGGATCCCATTACAAGCTTTGATGATTTCCACAAATTTTCAGTCTCAAACCCTGAGATATATTGGAAATGTGTTTTGGATGAAATGAACATATCATTTTCCAAACCACCTGAATGCATCTTACGTGATAGCCCCCCAGGGGAAGGCCCATTATCACACCCGAGTGGTCAATGGTTTCCTGGGGCATCTATTAATCCAGCACAGAATTGCTTAAATGTAAATGCCAAAAGAGGTTTGAATGATGCAGTAATAATATGGCGTGAAGAACAACATGATGATCTCCCTCTACAAAGGATGACACTGGAGGAATTGCGCGAAGAAGTTTGGTTAGTTGCATATGCTCTCAAATCTCTGGGTCTGGAGAAAGGATCCGCAATTGCGATTGATATGCCAATGAATGTCAAGTCTGTGGTTATCTACCTAGCTATCGTTCTTGCAGGTTATGTTGTTGTGTCGATTGCTGATAGTTTTGCAGCTAGTGAAATATCAACCAGGCTTAAAATATCAAAAGCAAAAGCCATATTTACTCAGGATCTCATTATGCGTGGTGACAAAAGTATCCCGCTTTACAGTAGAGTTGTGGATGCACAGTCACCGATGGCAATAATTTTTCCTACCAAAGGATCCGAATTTAGCATGAAACTGCGCAATGGTGACCTTTCTTGGAATGATTTTATGGAGAAAGTAAATAGTCTTAAAGGCAAGGAATTCATAGCTACAGAACAACCAGTAGAAACATTTACAAACATTCTCTTTTCTTCTGGAACAACAGGTGATCCAAAGGCAATTCCATGGACCAATATTACTCCTCTAAAAGCTGCTGCAGATGCATGGTGCCACATGGACATTCGTAAAAGTGATGTAGTGTGCTGGCCCACTAATCTTGGATGGATGATGGGACCATGGCTAGTATATGCATCCTTGCTAAATGGAGCTTCAATGGCTTTGTATATTGGTTCCCCTCTTGGGCCTGGCTTTGCCAAGTTTGTACAGTTTTTACCTCCTGTGTTATTTGTAATTTTAATGACATATTGCTTTGGCTCCACTGGTGAAGCATCTAATGTCGATGAATACCTTTGGCTTATGGGGAGAGCTCTCTACAAGCCTATCATTGAATATTGTGGTGGTACAGAAATTGGGGGTGGATTTGTTTGTGGATCACTACTACAGGCTCAGTCATTAGCTGCTTTTAGCACACCGGCTATGTGCTGCAGTTTGTTTATTCTTGATGATGATGGCCATCCTATTCCACAAAATGTTCCAGCAATAGGTGAGTTGGCTCTTGGTCCCCTAATGCTTGGGGCATCAAATACACTGCTGAATGCTGACCATCATGGTGTCTATTTCAAAGGAATGCCTCTCTTGAATGGAAAGGTTTTACGGAGGCATGGAGATGTATTTGAGCGTACTGCTAGAGGATACTATCATGCACATGGTCGTTCGGATGATACGATGAACCTTGGGGGAATCAAGGTAAGTTCGGTTGAGATTGAACGCATATGCAATGGAGTAGATAGCAATATTCTGGAAACAGCTGCAATAGGGGTACCACCTTCTGGTGGTGGACCTGAGTTGTTGACCATAGCTGTTGTATTCAAGGATTCAAACAACACAATGCAAGATTTACACCAATTGAGGATGTCTTTCAATTCAGCTCTCCAAAAGAAACTAAATCCACTGTTCAGGGTTTCTCAAGTAATCACAGTGCCATCTCTTCCAAGAACGGCATCCAACAAGGTTATGAGAAGGGTTCTGCGGCAGCAACTTTGCGAAACTAACCAAAATTCTAGAATATAA 2127 0.4344 MAYKSLSSITVSDIESHHGIAREDAATLHQRLAQIIEIHGDGTPATWQHVSSSVLNPELPFSLHQMLYYGCYKDYGPDPPAWIPDPESAALTNVWQLLETKGEEFLGSAYKDPITSFDDFHKFSVSNPEIYWKCVLDEMNISFSKPPECILRDSPPGEGPLSHPSGQWFPGASINPAQNCLNVNAKRGLNDAVIIWREEQHDDLPLQRMTLEELREEVWLVAYALKSLGLEKGSAIAIDMPMNVKSVVIYLAIVLAGYVVVSIADSFAASEISTRLKISKAKAIFTQDLIMRGDKSIPLYSRVVDAQSPMAIIFPTKGSEFSMKLRNGDLSWNDFMEKVNSLKGKEFIATEQPVETFTNILFSSGTTGDPKAIPWTNITPLKAAADAWCHMDIRKSDVVCWPTNLGWMMGPWLVYASLLNGASMALYIGSPLGPGFAKFVQFLPPVLFVILMTYCFGSTGEASNVDEYLWLMGRALYKPIIEYCGGTEIGGGFVCGSLLQAQSLAAFSTPAMCCSLFILDDDGHPIPQNVPAIGELALGPLMLGASNTLLNADHHGVYFKGMPLLNGKVLRRHGDVFERTARGYYHAHGRSDDTMNLGGIKVSSVEIERICNGVDSNILETAAIGVPPSGGGPELLTIAVVFKDSNNTMQDLHQLRMSFNSALQKKLNPLFRVSQVITVPSLPRTASNKVMRRVLRQQLCETNQNSRI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1175 708 Gene3D - 593 708 IPR045851 -
Aed10g1175 708 ProSitePatterns Putative AMP-binding domain signature. 360 371 IPR020845 -
Aed10g1175 708 Pfam Acetyl-coenzyme A synthetase N-terminus 118 180 IPR032387 -
Aed10g1175 708 Gene3D - 103 592 IPR042099 -
Aed10g1175 708 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 454 707 - -
Aed10g1175 708 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 441 - -
Aed10g1175 708 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 454 707 - -
Aed10g1175 708 PANTHER ACYL-ACTIVATING ENZYME 17, PEROXISOMAL-RELATED 3 441 - -
Aed10g1175 708 SUPERFAMILY Acetyl-CoA synthetase-like 107 701 - -
Aed10g1175 708 Pfam AMP-binding enzyme 205 597 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1175 Aed-Chr10 11156744 11167293 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1175 1 571 Acyl Lipid Metabolism Gene Families AT5G23050 63.790 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1175 - - gmx:100779628 1302.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1175 10 11156744 11167293 Aed10g1175 10 11156744 11167293 ECH