Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1162 ATGACGGTTCTAAACGGCACCGACGGCGCGCAACCACACGTGCTGGTGGTTCCGTTCCCAGCGCAGGGCCACATGATCCCCCTCCTCGACCTAACCCACAAGCTCGCCGCCTCCAACCCCAATCTCACCATCACCATCCTCACGACCCCAAAAAACAAACCCCTCATCACCTCTCTCCCTTCAATCCACCCCTTAATCCTCCCCTTCACCCCCCACCCTTCTCTCCCTCCAGGCATCGAAAACGTCAAACACATGCCCCACACCATCCGCCCCCTCATCCTCTCCCTCTCCACCCTCCACCTCCCTCTCCTCGCCTGGTTCCGCTCCCACCCCTCCCCTCCCTCCTTCATCATCTCCGACATGTTCTGCGGCTGGACCCAACCCCTCGCCTCAGAGCTACAAATCCAAAGACTCGTCTTCTCCCCGTCCGCCGCCTTCGCCTTCTCCACCATGTGCTTCCTCTGGAAAGACATGCCCATACCTAAAAACGACGTCGTTTCGTTTCACAGACTCCCCAACTCCCCGGAATACCCCTGGTCCCAGGTGTCCCCTCTCTTCCGCAGCTACGTGGATGGAGATTCGGATTCCGAGAAGCTGAGGGACTGGTTCCTCGGAAACTTCGAAAGCTGGGGACTTGTTGTGAGCTCGTTCTCTTACTTGGAGAGGCCTTATTTTGAGTTTCTGAGAAAGGAACTCGGGCATGATCGTGTGTGGGCGGTTGGACCGTTACTTCCCGAGGACGCGAGGGATCGAGGCGGGTACAGCTCGGTTTCGGTCAACGACGTCGTTTCGTGGCTTGACCAGAAGAAAGATCGGGAAGTTGTGTATGTTTGTTTCGGGAGCATTGCTGTTCTGTCGAAAGACCAGACGGATGCGATTCGGTCCGCGTTGGGGAAGAGTGGGGTCCACTTTGTATGGTCAATGAAAGAAGCGGCGGTCAACGGAAGTCAAAGCCAAGAAGAGAGTGAAGAGACTAGTAACGAGAGGGGAATCGTGATCAGGGGGTGGGCCCCGCAGGTGGTGATTCTTCGGCACCGTGCGGTGGGCGCGTTCCTGACTCACTGCGGATGGAACTCGGTGCTGGAATCGGTGGTCGCGGGGGCGCCGCTGCTTGCATGGCCTATGACGGCTGACCAGTTCGCGAACGCCACGTTGCTCGTGGAGGAGCTGAAGGTGGCGAAGAGAGTGTGCGAGGGGGAGAGGACCGTTCCCGACTCGGATCTGTTGAGTCGAGTTCTGGCTGAGTCGGTGAGTGGAAACGGAGATGAGACGAGACGGGCGTTGGAACTGAAGACGGCGGCGCTTGACGCTGTTAGAGAGGGTGGAAGCTCCGACAGCGACTTGCGGTGTTTAATAGAACGGCTACTTTCTCCGTTACAGTAG 1383 0.5799 MTVLNGTDGAQPHVLVVPFPAQGHMIPLLDLTHKLAASNPNLTITILTTPKNKPLITSLPSIHPLILPFTPHPSLPPGIENVKHMPHTIRPLILSLSTLHLPLLAWFRSHPSPPSFIISDMFCGWTQPLASELQIQRLVFSPSAAFAFSTMCFLWKDMPIPKNDVVSFHRLPNSPEYPWSQVSPLFRSYVDGDSDSEKLRDWFLGNFESWGLVVSSFSYLERPYFEFLRKELGHDRVWAVGPLLPEDARDRGGYSSVSVNDVVSWLDQKKDREVVYVCFGSIAVLSKDQTDAIRSALGKSGVHFVWSMKEAAVNGSQSQEESEETSNERGIVIRGWAPQVVILRHRAVGAFLTHCGWNSVLESVVAGAPLLAWPMTADQFANATLLVEELKVAKRVCEGERTVPDSDLLSRVLAESVSGNGDETRRALELKTAALDAVREGGSSDSDLRCLIERLLSPLQ 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1162 460 Gene3D Glycogen Phosphorylase B; 10 261 - -
Aed10g1162 460 PANTHER UDP-GLYCOSYLTRANSFERASE 89A2 9 454 - -
Aed10g1162 460 PANTHER GLYCOSYLTRANSFERASE 9 454 - -
Aed10g1162 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 455 - -
Aed10g1162 460 ProSitePatterns UDP-glycosyltransferases signature. 336 379 IPR035595 -
Aed10g1162 460 CDD GT1_Gtf-like 12 446 IPR002213 GO:0008194
Aed10g1162 460 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 270 387 IPR002213 GO:0008194
Aed10g1162 460 Gene3D Glycogen Phosphorylase B; 262 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1162 Aed-Chr10 10947739 10949121 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1162 11 457 Glycosyltransferase AT1G73880 53.145 2.62e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1162 - - gmx:100779428 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1162 10 10947739 10949121 Aed10g1162 10 10947739 10949121 ECH