Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1161 ATGAAGGAGGTGGTGTTGTCGGTAGAGAAGAAGAGTGAGAGGAGAAGAGGAGGGAGGGTGGTTTGGGAAGGACTAATGATGTTGGGTTTGAAAGGGGAAAGTAATAGCAACAATCATAACAACAGTAAGTTGAAGAATTCGATGGTGCTTTCTTCCGCGAGGTCTTCGAGGACGAAGCTGTGGATGATACGCGCCACCACATCGGTGTTACTGTGGACCTGCATCGTTCAGTTAACCGCGTTGGGGGATATGTGGGGCCCGCGGGTCCTGAAAGGCTGGCCGTCCTGCTTCACGCACGAATCCGCGATCATTGAGTTGCCGTCCGCCGCGACGCCCAGAGTTCTCCCACCCAAGAGGGTTTATAAGAACAACGGTTACTTGATGGTGTCGTGCAATGGAGGACTCAACCAGATGAGGGCAGCGATATGCGACATGGTGGCGATTGCTAGGTATTTAAACGTGACGCTCATAGTGCCTGAATTGGATAAAGCGTCCTTTTGGGCTGACCCCAGTGAGTTCGAAGACATCTTTGATGTGGATCATTTCATTACATCCTTGAGGGATGAGGTGCGGATATTGAAAGAGTTGCCTCCTAGACTCAAGACTAGAGTGGAAAATGGATTACTTTACACCATGCCACCGATTAGTTGGTCTGACATATCATACTATAAGAACCAGATTTTACCATTGATACAAAAGTACAAAGTTGTCCATTTAAATCGAACGGATGCTCGGCTGGCCAATAACGACCAACCTTTGGAGATTCAGCGGCTGCGTTGCAGAGTCAATTTTAGTGCTCTTAGATTTACTCCTCAGATTGAGGAGTTAGGCAGAAGGGTGATCAAGCTTCTTAGGCAAAATGGCCCATTTTTGGTGCTTCATCTGAGGTATGAGATGGACATGCTGGCATTTTCTGGCTGTACACAAGGTTGCAACAGTGATGAAGTGGAAGAATTGACGAGGATGAGATATGCTTATCCTTGGTGGAAAGAAAAAATAATTAATTCTGATTTGAAAAGAAAAGATGGTTTGTGTCCATTAACACCTGAGGAGACTTCCCTTACACTTAGGGCTCTTGACATCGATCAAAGCATTCAAATCTACATTGCAGCTGGGGAAATATACGGTGGACACAGGAGAATGGCAAGTCTTACAAAGAACTATCCAAAAGTGGTCAGGAAGGAAACACTGTTGGAGCCATCTGACCTTCAGTTCTTCCAAAATCATTCCTCACAGATGGCGGCATTGGATTACCTGGTGTCGTTAGAGAGTGATATCTTCGTTCCTACATACGATGGAAATATGGCCAAAGTAGTCGAGGGTCATCGCAGATATATTGGGTTCAAGAGGACAATTTTATTGAACAGAAAGCTCCTAGTTGATTTGATAGATCAATACCATGACGGAGTATTGGACTGGGAAGAATTCTCCTCAGCCGTGAAGGAAACTCATGCTAACCGCATGGGTGGTGCAACTAAGAGATTGGTAATCCCTGACAGGCCCAAAGAAGAGGATTATTTCTATGCCAATCCAGAGGAATGTTTAGAACTATCAGATGATATGTTGAGTAGTACGTGA 1578 0.4537 MKEVVLSVEKKSERRRGGRVVWEGLMMLGLKGESNSNNHNNSKLKNSMVLSSARSSRTKLWMIRATTSVLLWTCIVQLTALGDMWGPRVLKGWPSCFTHESAIIELPSAATPRVLPPKRVYKNNGYLMVSCNGGLNQMRAAICDMVAIARYLNVTLIVPELDKASFWADPSEFEDIFDVDHFITSLRDEVRILKELPPRLKTRVENGLLYTMPPISWSDISYYKNQILPLIQKYKVVHLNRTDARLANNDQPLEIQRLRCRVNFSALRFTPQIEELGRRVIKLLRQNGPFLVLHLRYEMDMLAFSGCTQGCNSDEVEELTRMRYAYPWWKEKIINSDLKRKDGLCPLTPEETSLTLRALDIDQSIQIYIAAGEIYGGHRRMASLTKNYPKVVRKETLLEPSDLQFFQNHSSQMAALDYLVSLESDIFVPTYDGNMAKVVEGHRRYIGFKRTILLNRKLLVDLIDQYHDGVLDWEEFSSAVKETHANRMGGATKRLVIPDRPKEEDYFYANPEECLELSDDMLSST 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1161 525 CDD O-FucT_plant 126 451 IPR024709 -
Aed10g1161 525 PIRSF UCP009360 26 512 IPR024709 -
Aed10g1161 525 ProSiteProfiles EF-hand calcium-binding domain profile. 461 486 IPR002048 GO:0005509
Aed10g1161 525 PANTHER OS02G0726500 PROTEIN-RELATED 28 520 - -
Aed10g1161 525 PANTHER GDP-FUCOSE O-FUCOSYLTRANSFERASE-LIKE PROTEIN 28 520 - -
Aed10g1161 525 Pfam GDP-fucose protein O-fucosyltransferase 126 445 IPR019378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1161 Aed-Chr10 10924259 10929419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1161 122 515 Miscellaneous Gene Families AT2G37980 50.000 4.70e-132 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1161 K23280 - gmx:100778901 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1161 10 10924259 10929419 Aed10g1161 10 10924259 10929419 ECH