Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1156 ATGGCAGAAACTGATAGCAACCATAAGGAAATCCAAATCCAAATCCAAATCCAAATCCGTGCCCTAACTGGCGAGTCCATCACTCTTCCCGGTGAGAAATTGCGATTGGAGACTCGAATCCACTCTTTCCCCATCCAACGCGGCGAGTTTCTCGTTCTCATTCCCTTCGCTAAGAAGGAAAAGGAGCCTTCTCGAACCCGCGATTCGGACTCAGTCTCGAACGCTCCTCCAACTGCTTCAATTTCCACTCTCGCGGACTCCACGTGGTCCACCATAAAGGACGATTTGTCACTTCTACGTGACACCGTCGCCGAGAGTTGCGAGAATGCTTCTAATTCAGAGGAAGTGTTGCAGACACAGACCAAAGGGGCTTTGGGTTCTGAGAAGCAGATAGAGCTTCCATATCATCTCATACTGAACACATTGCGAGATATTAGCGAGGGTGGTGGTGCTGGTGCTCTTGGTGAGCACAATTGCGAGGTTTTCGTGAAGCTTTTGGAGTCTGTGAATTGCTTATCGGACCTGCCTCTCGGACACTGCAAGTTGTTGAAACAAGCTTGTGGAAAAAGAGGTAGTGGTGGTGGTGGCTTGAGAAAACATGTTAGTGATGGTGCTAGGTGTATTTGTCCACCGTGGTTGAAGATAGTGGTGAAGGCCTTTGCTTTCGTGAACATTTTTGCCACGTTTCTGTATTTGCAGCGGAGGGAATTGACCTCAGTTCTGCTGGGAGAGGCGCTTAGTGAGCTCACGAAGTTTGGGGTTAAACTTGGCCTTGATGACATGAAGCATCTTTCACTGCTTTGTCCTCATCTGGTATGTTTTGGAGATGATGTAGAAAAGACAAATTTTGGTGATGTCATTGTTGTTGTTAACAATGCAAAGGACAATGATGATCAAGTTGAAGACAATCCTAAAAGAGTGCGCAAGTGGTTGTATGTTTCGAAGACTGTCAGTACATTGAAGAGAAGGGATAGCTCTTTCAGAAAATATCTAGGGTGGGCTTTTGAGCAGCTGCCGTTTGAATTTGGAGATGAGATGACTGTGGGAATTTCTTTGGAAGAGCTGCTTGCTGCAGTCAAGGACTGTGATTTTGTTGGAAAAGAAGACAAATCAAAACGTGTAAAGAGATGCAAAAATGCCTCAAATCCTGGCTTAAACCACCATATTCGGTGTCATGATACAAAGTCATTACTGGCTATGGATATGGTTGATCATCTTAAGAAAGGAGTTGGATCTGAAGGACAGATTGTGCATATTGAAGACATATGTGCCAGAAAAGCGATTTACAGTGAGATCCCATTTGAACTATCAGAGGAAATGAGATCGGTACTAAAGTGTATTGGAGTTTCCAAATTTTACAGTCACCAGGCAGAGTCTATACAAGCTTCCCTTAATGGCAAAAATGTTGTTGTGGCTACAATGACATCTAGTGGAAAATCCCTTTGCTATAACCTACCAGTTCTAGAAGTTTTGTCCAATAATTCATCTTCATCTGCTCTGTACATATTTCCCACAAAGGCATTAGCTCAAGATCAACTAAGAGCTTTGTTACACATGACAAAAGGATTTGACATGGACTTAAATATTGGAATATATGATGGTGACACTTCTCACAATGAGAGGATGTGGCTACGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCACCATCAACAATTTTGTCGGATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAACTCATACTTACAAGGGAGCATTTGGATGCCACACTGCCCTTATATTGAGGAGGTTAAAACGACTCTGTTCACATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGGAGCATTCTATGGAACTTGCAAATCTATCTACACTGGAGCTATTTCAAAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAATCCTGCTTTGCGTCCAAAAGCTATCATTAAAAAAACTCAGTTTGCTAAGAGAACTGATGAGTTGGCAGATGAAAGTGAAAGTTTTGTTCGTTCAAGCCCAATTGTGGATGTTTCACGTCTTTTTGCCGAAATGGTTCAGCATGGTCTTCGTTGTATTGCATTTTGTAAATCAAAGAAACTTTCTGAGCTTGTTTTATCCTATGCACGGGAGATTCTTCATGAGACAGCCCCTCATCTGGTGGATTCCATATGTGCATATCGTGGTGGCTACATTGCAGAGGAAAGAAGAAAAATAGAGAGTTCATTGTTTGGTGGTAAAATATGTGGTGTTGCTGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCTTGTGGCAACAAGCTGGTAGAGGTGGGAGGCGAGATAGACCATCTCTTGCTGTCTATGTTGCATTTGGTGGGCCTCTTGATCAATACTTCATGAAACATCCCAAGAAACTCTTTGAAAGACCAATTGAATGTTGTCATGTTGATTCCCAAAACAAGCAGGTTCTTGAACAACATTTGGTTTGTGCAGCTCACGAACACCCTTTGAGTGTGAACTATGATGAGCAATATTTTGGTCCTTGCTTGGAGAGTGCTATAATTTCTCTTAGAGCTAGAGGATACTTGAGTTCTGTTCGATCATCTGATTCTTCTAGAAAATGGAACTACATTGGTCCTGAGAAACTACCCTCACATGCAGTCAATATCCGAGCAATAGAAACTATAAGATACAGTGTCATAGATCAGAAAAAAAATGAAGTCCTTGAAGAGATTGAGGAAAGCAAGGCATTCTTTCAGGTTGTATATGAAGGTGCTGTATATATGTACCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTAACTAACAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATATTGCTTATCCAGTCAAGGTAGAAACCAACATGTTTCCAAAAACAAATGCCCGGGTTGATGTATGCAAAGTAACAACTACTTGGTTTGGCTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATACTGTTGACCTCTCACTTCCTCAATACTCATATGAGTCACAGGCAGTTTGGGTTCCTGTGCCACAGTCAATAAAAGAAGCAGTAGTCAAGCAAAACTATGATTTCCGTGGAGGTCTGCATGCTGCTTCGCATGCAATTTTACATGTAGTGCCTTTACATATCACATGCAACTTGTCTGACTTGGCTCCTGAGTGTCCAAACCCTCATGATAGCCGATATTACCCTGAACGAATTCTAATATATGATCAACATGCTGGAGGGTGTGGAATTTCAGTACAGGGTCAACCCTACTTCACGAAGTTCCTGGCAGCTGCACTAGAGCTTCTCACATGTTGCTGCTGCTCAGCGAAAGTAGGTTGCCCTAATTGTGTTCAGAGCTTTGCTTGCAATGAGTATAATGAGGTTTTAGACAAGGATGCAGCCATCATGATCATCAAGGTGACTTGA 3576 0.4175 MAETDSNHKEIQIQIQIQIRALTGESITLPGEKLRLETRIHSFPIQRGEFLVLIPFAKKEKEPSRTRDSDSVSNAPPTASISTLADSTWSTIKDDLSLLRDTVAESCENASNSEEVLQTQTKGALGSEKQIELPYHLILNTLRDISEGGGAGALGEHNCEVFVKLLESVNCLSDLPLGHCKLLKQACGKRGSGGGGLRKHVSDGARCICPPWLKIVVKAFAFVNIFATFLYLQRRELTSVLLGEALSELTKFGVKLGLDDMKHLSLLCPHLVCFGDDVEKTNFGDVIVVVNNAKDNDDQVEDNPKRVRKWLYVSKTVSTLKRRDSSFRKYLGWAFEQLPFEFGDEMTVGISLEELLAAVKDCDFVGKEDKSKRVKRCKNASNPGLNHHIRCHDTKSLLAMDMVDHLKKGVGSEGQIVHIEDICARKAIYSEIPFELSEEMRSVLKCIGVSKFYSHQAESIQASLNGKNVVVATMTSSGKSLCYNLPVLEVLSNNSSSSALYIFPTKALAQDQLRALLHMTKGFDMDLNIGIYDGDTSHNERMWLRDNSRLLITNPDMLHISILPHHQQFCRILSNLRFVVIDETHTYKGAFGCHTALILRRLKRLCSHVYGSVPSFVFSTATSANPREHSMELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKTQFAKRTDELADESESFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSKKLSELVLSYAREILHETAPHLVDSICAYRGGYIAEERRKIESSLFGGKICGVAATNALELGIDVGEIDATLHLGFPGSIASLWQQAGRGGRRDRPSLAVYVAFGGPLDQYFMKHPKKLFERPIECCHVDSQNKQVLEQHLVCAAHEHPLSVNYDEQYFGPCLESAIISLRARGYLSSVRSSDSSRKWNYIGPEKLPSHAVNIRAIETIRYSVIDQKKNEVLEEIEESKAFFQVVYEGAVYMYQGKTYLVEKLDLTNKTAFCKEADLKYYTKTRDYTDIHVIGGNIAYPVKVETNMFPKTNARVDVCKVTTTWFGFYRIWRGSNQIFDTVDLSLPQYSYESQAVWVPVPQSIKEAVVKQNYDFRGGLHAASHAILHVVPLHITCNLSDLAPECPNPHDSRYYPERILIYDQHAGGCGISVQGQPYFTKFLAAALELLTCCCCSAKVGCPNCVQSFACNEYNEVLDKDAAIMIIKVT 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1156 1191 Pfam DEAD/DEAH box helicase 454 623 IPR011545 GO:0003676|GO:0005524
Aed10g1156 1191 CDD SF2_C_Hrq 654 818 - -
Aed10g1156 1191 PANTHER ATP-DEPENDENT HELICASE HRQ1 27 1189 - -
Aed10g1156 1191 Pfam MrfA Zn-binding domain 1085 1167 IPR018973 -
Aed10g1156 1191 CDD DEXHc_Hrq1-like 452 633 - -
Aed10g1156 1191 Pfam Helicase conserved C-terminal domain 701 807 IPR001650 -
Aed10g1156 1191 Gene3D - 424 643 IPR027417 -
Aed10g1156 1191 SMART ultradead3 448 654 IPR014001 -
Aed10g1156 1191 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 694 850 IPR001650 -
Aed10g1156 1191 SMART helicmild6 728 809 IPR001650 -
Aed10g1156 1191 Gene3D - 690 816 IPR027417 -
Aed10g1156 1191 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 460 641 IPR014001 -
Aed10g1156 1191 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 461 816 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1156 - - gmx:100819522 2075.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1156 10 10805618 10817065 Aed10g1156 10 10805618 10817065 ECH