Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1152 ATGCGGCGACGGGCCGCCGAGTATCGGCGCCCGGTTCGGCGGCGGTTCTCTCATTGGATCTGGTGGTTGCTTCTCGGTGCCTTCTCTCTCGCCGCTTTGCTTCTGTTCCTCGTGCAGCACAATCACCGCCAAGATCGGGTCCAACACTCTCTTCTGGAGAGAAATGCTATAGTTGAACATTTTGCTAAGAGATTTAATTTTACTGAAGAAATTTTAAGTGCAACATCCTTTTCACGGCAATTATCAGAGCAAATGGTTCTGGCCAAGGCTTATGTGATTATTGCCAAAGAGCACAATAATCTTCATCTTGCCTGGGAGCTTAGCTCAAAGATTAGAAGTTGCCAGCTTTTGCTTTCAAGAGTTGCCATGACAGGGGAGCCTGTGACCAAGGAGGAAGCCGAGCCAATTATTAAAAGCCTGTCTTCTCTAATATTCAAGGCACAAGATGCCCATTATGACATTGCAACCACTATAGCAACAATGAAATCACATATTCAAGCACTTGAAGAGCGTGCAAATACAGCAACAGTTCAAAGCACTGTGTTTGCTCAAATATCGGCTGAAGCACTACCCAAAAGTCTTCATTGCTTAAATGTGAAACTTATGGCTGATTGGCTGAAGACACCATCCCTGCAAGAACTCTCACATGAGAGTAGAATCTCCCCCCGGCTCACAGATAACAATCTATATCATTTCTGCATTTTTTCAGATAATGTCCTGGCTACATCTGTCGCTATTAACTCAACAGTCACCAATGCTGACCATCCAAAACAGTTAGTCTTTCACATTGTTACTGATGGTATCAATTATGGAGCAATGCAAGCATGGCTCCTCAGTAATGACATTAAAGGGGCTACCATAGAGGTGCAGAATATTGAGGAATTTCATTGGTTGAGTGAATCTTATTCTCCAATTGTCAAACAGCTACACAGTCCAGAATCACGAGCCTTCTATTTTGGACCCTATCAAGGTGTAAACATTGAGCCGAAATTGCAGAACCCCAAGTTTTTGTCTTTACTAAATCATCTCCGGTTCTACATCCCCGAGATTTATCCACTACTTGAGAAGGTTGTTTTCCTTGATGATGATGTTGTTGTCCAGAAGGACCTAACCCCACTTTTCTCACTGGATTTGCATGGAAATGTGAATGGTGCCGTTGAAACTTGTCTAGAAGCATTCCATAGGTACTACAAGTATCTCAACTTCTCAAATTCAATTATCAGCTCAAAGTTTGATCCACAGGCATGTGGATGGGCACTTGGTATGAATGTTTTTGACTTGGTTGCATGGAGGAAAGCAAATGTGACTGCAAAGTTCCATTATTGGCAGGAGCAGAATGCTGACGGGACACTCTGGAAACTCGGTACGCTTCCACCTGCTCTTCTAAGCTTTTATGGTTTGACAGAACCACTTGACAGAAGATGGCATGTTTTAGGATTGGGTTATGACCTAAACATTGATAACCGCTTGATTGAAAGTGCAGCAGTTATTCACTTCAATGGGAACATGAAACCATGGCTGAAGTTAGCTATAGGCAGGTATAAGCCATTATGGCACAGGTACATAAATCAAAGTCACCCTCATCTACAAGATTGTGCCTCAGGTTAA 1608 0.431 MRRRAAEYRRPVRRRFSHWIWWLLLGAFSLAALLLFLVQHNHRQDRVQHSLLERNAIVEHFAKRFNFTEEILSATSFSRQLSEQMVLAKAYVIIAKEHNNLHLAWELSSKIRSCQLLLSRVAMTGEPVTKEEAEPIIKSLSSLIFKAQDAHYDIATTIATMKSHIQALEERANTATVQSTVFAQISAEALPKSLHCLNVKLMADWLKTPSLQELSHESRISPRLTDNNLYHFCIFSDNVLATSVAINSTVTNADHPKQLVFHIVTDGINYGAMQAWLLSNDIKGATIEVQNIEEFHWLSESYSPIVKQLHSPESRAFYFGPYQGVNIEPKLQNPKFLSLLNHLRFYIPEIYPLLEKVVFLDDDVVVQKDLTPLFSLDLHGNVNGAVETCLEAFHRYYKYLNFSNSIISSKFDPQACGWALGMNVFDLVAWRKANVTAKFHYWQEQNADGTLWKLGTLPPALLSFYGLTEPLDRRWHVLGLGYDLNIDNRLIESAAVIHFNGNMKPWLKLAIGRYKPLWHRYINQSHPHLQDCASG 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1152 535 CDD GT8_like_1 230 523 - -
Aed10g1152 535 Coils Coil 158 178 - -
Aed10g1152 535 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 3 534 IPR029993 GO:0047262
Aed10g1152 535 SUPERFAMILY Nucleotide-diphospho-sugar transferases 230 532 IPR029044 -
Aed10g1152 535 Pfam Glycosyl transferase family 8 234 509 IPR002495 GO:0016757
Aed10g1152 535 PANTHER HEXOSYLTRANSFERASE 3 534 - -
Aed10g1152 535 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 231 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1152 Aed-Chr10 10777734 10781634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1152 1 532 Glycosyltransferase AT2G20810 54.004 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1152 K13648 - gmx:100817381 993.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1152 10 10777734 10781634 Aed10g1152 10 10777734 10781634 ECH