Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1143 ATGAGGTGGGAAAAGGTGAAGGGAATAGGAGAAGAAGGACCAGGCAAGAGGTGGGGCCACACTTGTAACTCCGTTAGAGATGGCAGATACCTTTATCTCTTCGGCGGTTACTGCGGCAAATTCAACTGTCATACCAACCAAGTTCACCTCTTTGACACTATGAGGCAGAAATGGAGTCAACCAACAATTAAAGGCATCCCACCTATTGCTAGGGACAGCCATAGTTGCACTGTTGTTGGTGATAATCTGTTTGTGTTTGGGGGCACAGATGGGTCCAAGCTGCTGAATGATTTGCACATACTAGATACTTCTTCACATAATTGGATTCTTCCAATTGTGGGAGGGGAAGAACCGGATGGGCGTGAGGGTCATGGTGCAGCACTTGTTGGCAAACGACTATTTGTGTTTGGTGGTTGTGGAAGATGTGCTAATAATATTCTTGAGGTGTACTACAATGACCTTTATATGTTGAATACAGCAACGTATCTTTGGAGTCGTGTTAAAACATCAGGCACTCTACCATCTCCTCGTGATGCCCATACTTGCTCATCTTGGAGAAATAAAATTATTGTGATAGGTGGTGAAGATGAAAATGATTCTTACCTGTCTGATGTCCACGTGCTAGATACTGATACTCTAATCTGGAGTAAACTGCGTACATCAGGCCAATCGCTGCCACCTCGAGCCGGTCATTCTGCAGTTACTTTTGGCAATAAGTTGTTTGTTTTTGGGGGCTTTACAGATACTCAAACCCTGTACAATGATCTGTATATGCTTGACATTGAGGCTTGTGTGTGGACAAAGGTGGCAACTACACCTAATAGTCCTCCGGCTAGATTTTCTTTAGCCGGTGACTGTTTAGACCCATGTATGAGTGGTGTTCTTGTGTTTGTTGGTGGTTGCAATAGAAATCTGGAGGGCCTGGATGATATGCATTACCTATACACAGGGTTTGCAAAGGAAAGTGAACAGAAACTAGAGAAGTTATCCTTAAAGAAACAATTGAAGCTGAAATGTCTAGAACAGAACCCCAATCTTGTCCAAAACCAACTTCTGAGTGGATATGGAGTGTTTTCTGGCCGCATGACACTCTTGGACTATAGCCAACAAAGTGGACATGTCCCAGTAAATGGCCTCAAGCCTCTTGAGGCTGGAAAGAAAATGTTTCAAGCCAAAGTTATGGAAAAAAGCTCAATAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCGAGGAATTCTGTTTATGAACCAGCCAACAAGCACTCCTCAACCAGTTCCTAGGAAAAGGGTCAGACAAACTTCCAGTCATGATTCAACTGGCATACACTCACACAATGTAACGGCTTCTAAAGTGCGGAGGCCAGATGGAATGGAAGATAAAAAGGAATTACAAATAGAGAGTTCAGAATCTCATGAATGCCAAAAGGAAGCTGATACTATTGTTGGATCAAGTAACCCTACAGCTGCTGCTGCCGGGTCCTTTAAGGTTTCTGTCAACACAGAGCCAGAGTCTGTTCCTTTGAATAGAAATGGTGATGAAAAAAATGACACACCAAAATTCAAGAGCTTGAAAAATGATGGATCCAAAGGTGAAGTACAAATTGGTGATCAAATAAATGTGCCAGTTGCCAACTATGAAATTCCAAGACAAGTGAGTGATGCACCAAACAGTAATGCTGATGTCCTGAAACCTGCAGCAGATGAGTGTTGTGTATCCACCAATCAAGGTATGATTCGTATGAAACAAGTTGAGAATTCTACTAATATGCCTATTAGTTTTATATATGAGAGAGAGATCATCATGGTGTTTTGTCTTGATAACTACCTCATTGAGAAAAAAAGTCATTATGTTTACATTTAG 1869 0.4179 MRWEKVKGIGEEGPGKRWGHTCNSVRDGRYLYLFGGYCGKFNCHTNQVHLFDTMRQKWSQPTIKGIPPIARDSHSCTVVGDNLFVFGGTDGSKLLNDLHILDTSSHNWILPIVGGEEPDGREGHGAALVGKRLFVFGGCGRCANNILEVYYNDLYMLNTATYLWSRVKTSGTLPSPRDAHTCSSWRNKIIVIGGEDENDSYLSDVHVLDTDTLIWSKLRTSGQSLPPRAGHSAVTFGNKLFVFGGFTDTQTLYNDLYMLDIEACVWTKVATTPNSPPARFSLAGDCLDPCMSGVLVFVGGCNRNLEGLDDMHYLYTGFAKESEQKLEKLSLKKQLKLKCLEQNPNLVQNQLLSGYGVFSGRMTLLDYSQQSGHVPVNGLKPLEAGKKMFQAKVMEKSSIGYTIETVIDGKPLRGILFMNQPTSTPQPVPRKRVRQTSSHDSTGIHSHNVTASKVRRPDGMEDKKELQIESSESHECQKEADTIVGSSNPTAAAAGSFKVSVNTEPESVPLNRNGDEKNDTPKFKSLKNDGSKGEVQIGDQINVPVANYEIPRQVSDAPNSNADVLKPAADECCVSTNQGMIRMKQVENSTNMPISFIYEREIIMVFCLDNYLIEKKSHYVYI 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1143 622 Gene3D - 114 342 IPR015915 GO:0005515
Aed10g1143 622 SUPERFAMILY Kelch motif 3 167 IPR015915 GO:0005515
Aed10g1143 622 PANTHER KELCH REPEAT DOMAIN 9 424 - -
Aed10g1143 622 Pfam Kelch motif 121 168 IPR006652 GO:0005515
Aed10g1143 622 Pfam Kelch motif 24 60 IPR006652 GO:0005515
Aed10g1143 622 Gene3D - 1 113 IPR015915 GO:0005515
Aed10g1143 622 MobiDBLite consensus disorder prediction 419 450 - -
Aed10g1143 622 MobiDBLite consensus disorder prediction 510 529 - -
Aed10g1143 622 PANTHER GALACTOSE OXIDASE/KELCH REPEAT SUPERFAMILY PROTEIN 9 424 - -
Aed10g1143 622 MobiDBLite consensus disorder prediction 468 534 - -
Aed10g1143 622 Pfam Galactose oxidase, central domain 227 276 - -
Aed10g1143 622 Pfam Galactose oxidase, central domain 176 226 - -
Aed10g1143 622 Pfam Galactose oxidase, central domain 70 108 - -
Aed10g1143 622 SUPERFAMILY Kelch motif 118 306 IPR015915 GO:0005515
Aed10g1143 622 MobiDBLite consensus disorder prediction 480 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1143 Aed-Chr10 10652475 10660365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1143 106 314 Acyl Lipid Metabolism Gene Families AT3G05420 31.222 1.22e-27 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1143 - - gmx:100785267 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1143 10 10652475 10660365 Aed10g1143 10 10652475 10660365 ECH