Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1141 ATGGATGTTGTAAATGATTTGCATATGGGGCCTCCAGCAACAACCAATTTGGAAGATTCAACTAGTACAGAGGATTTAAATTCATTGCAGAAGCAGAAAATGGCGAGAAAGAAGAATAAACAAGGTAATTCTTCTGTTGAGAGTGAAGGTCCTGATTTTTCACTGGATAATTCTTCACCAAAGACGGATGGTACTATAAAGTACCCATTACATGAGTCCCCAGATTTACCTAATTTCTTAAGTTGCCAAATAGTTGTAGAATATAATTCAACAGAGAATGAAAAGAGCAAACGGCAGAAGACAACACATAATGCTATTGAAGGCAATGTCAATGGTTGCGGCACTCCAGAGAATAGTTTTTCACCAAAAGCTTCCACACCTTCATTGGATGTGCCTTCAGAACATCCCATTCAATGTTTTTCCACTGATCCAAAAACAAGTCAATCTTGTGTGGAAGTGGGTGTTTGTCAGGGACATAATGAAGAAAAGGAGCAGAATATGAGCAATACTTCTGCAGAAAATAGCAATTCACAGCATGACATTCCAGAAGAAAGCTGTAATCACATTTCAGTTGCAGCAAGTCCTGAGCCTTTTGCGGAAGATTGTGTGTCAGAAGTTGTAAATATGAACATAGAGCATGGTATAAATGATAACATTTCCAACCCCGAGGATGAGAATGGCTTTGTAAAGAATACAAGTCTGGTGAAGAAAAATGTTGATGACTCAACAGATTATGGCTTGCCTGATAAAAATCTGGGTGTTAAAACCTATGCAAGGAGAAAAATGGTTAATTCCAGTTGCATGGGAAACGGTGATTCCCCAACTCCTGAAAATTGTAACAAGGAACCAACTATTCAGGATCATCAAAAGGATGATTCACACAAATTTTCTGATGGACCATTGGGAGTTGGCTTGATGGATGGAGAAACAAAACTTTCAATTGATCAAGTTACCACACAAAGTGAAGCTGCAGCTGAGGAAACAAAGTTGAGCTCTGACAACATTGATGTACAAATTTCTGCAGTAGACATTCCTTTGGAGCATCTCGAAACAGATGGTAGACAGCTAGATCATACTGAGATTACAAGAAATGAACCATGTTGTGCAGGTGATGTTTCTGATTTAAGCTCAGACACAGTAAGAGACGGTCATTTAAAGATTTCACAATTCTCACTAGACCAAAATTCTGCTGGCAACCTGAAGAATAAGCTTCTCATCCTTGATGTGAATGGACTGCTTGCTGATTTTGTCAGTATCAGCGACACTCGTACAAGATATAGACGAGAACCAGAGCCAGATTTTGTACTTAAAGGGAGAAAAGTCTACAAGAGGCCCTACTGTGACGATTTTCTTCAGTTTTGCTTTGACAGATTTCATGTGGGAGTATGGTCATCTAGATCCAAGAGCAATGTCGATGAAGCAATCAAATTTCTTATGGGGACATCTGTATCCAAATTGCTCTTTTGTTGGAATCAGTCTCACTGTACTACAACAAATTTCACTACTGTTGAGAATATAGACAAGCCCCTTGTGTTGAAGGAAATAAGAAAGTTGTGGGAAAAGGTAGAACCTGATCTACCATGGGAGAAGGGAGAGTTTAATGAGTCAAACACATTATTATTGGATGACTCCCCTTACAAGGCACTAATGAATCCTAGGAATTCAGCAATATTTCCTTATTCTTACCGGTACTACGACACCAGAGACTCAGAATTAGGACCAGGAGGCGATCTTCGGGTTTATCTAGAAAAGCTGGCCAAGGCCGAGCATGTGCAAAACTACGTGTCAGAAAATCCGTTTGGCCAACGGCCCATAAGAGAAGCAAATCCATCCTGGCGTTACTATCGTAAAGTTATAGACTCACTTCAATGA 1872 0.3969 MDVVNDLHMGPPATTNLEDSTSTEDLNSLQKQKMARKKNKQGNSSVESEGPDFSLDNSSPKTDGTIKYPLHESPDLPNFLSCQIVVEYNSTENEKSKRQKTTHNAIEGNVNGCGTPENSFSPKASTPSLDVPSEHPIQCFSTDPKTSQSCVEVGVCQGHNEEKEQNMSNTSAENSNSQHDIPEESCNHISVAASPEPFAEDCVSEVVNMNIEHGINDNISNPEDENGFVKNTSLVKKNVDDSTDYGLPDKNLGVKTYARRKMVNSSCMGNGDSPTPENCNKEPTIQDHQKDDSHKFSDGPLGVGLMDGETKLSIDQVTTQSEAAAEETKLSSDNIDVQISAVDIPLEHLETDGRQLDHTEITRNEPCCAGDVSDLSSDTVRDGHLKISQFSLDQNSAGNLKNKLLILDVNGLLADFVSISDTRTRYRREPEPDFVLKGRKVYKRPYCDDFLQFCFDRFHVGVWSSRSKSNVDEAIKFLMGTSVSKLLFCWNQSHCTTTNFTTVENIDKPLVLKEIRKLWEKVEPDLPWEKGEFNESNTLLLDDSPYKALMNPRNSAIFPYSYRYYDTRDSELGPGGDLRVYLEKLAKAEHVQNYVSENPFGQRPIREANPSWRYYRKVIDSLQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1141 623 MobiDBLite consensus disorder prediction 14 29 - -
Aed10g1141 623 MobiDBLite consensus disorder prediction 1 73 - -
Aed10g1141 623 MobiDBLite consensus disorder prediction 39 64 - -
Aed10g1141 623 Pfam NLI interacting factor-like phosphatase 403 591 IPR004274 -
Aed10g1141 623 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 23 622 - -
Aed10g1141 623 MobiDBLite consensus disorder prediction 162 182 - -
Aed10g1141 623 Gene3D - 373 600 IPR023214 -
Aed10g1141 623 SMART forpap2 401 567 IPR004274 -
Aed10g1141 623 ProSiteProfiles FCP1 homology domain profile. 398 585 IPR004274 -
Aed10g1141 623 SUPERFAMILY HAD-like 400 594 IPR036412 -
Aed10g1141 623 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 23 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1141 Aed-Chr10 10632932 10637860 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1141 - - gmx:100806707 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1141 10 10632932 10637860 Aed10g1141 10 10632932 10637860 ECH