Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1123 ATGGAAGGTTTAGCGAGTTCTGGGATCAACACAGTTCGTGTTTTTGGCATTCCAAAACACCAATCTCGTTTTCTCCCTTCATCAACTCTGCATCTGAGGAACAGTAGTGTGTGTGGAATTGGAATTGACAACAAGAAGAAGAAACAGTGGGTTCTTGAGCTTTGGAGAAATGGTGATGCTGTGTGCTTTGATGTGGATAGCACTGTGTGCTTGGATGAAGGGATTGATGAGCTTGCTGAATTCTGTGGGGCTGGAAAGGCCGTGGCTGAATGGACTGCTAGAGCGATGGGTGGTTCTGTTCCGTTTGAGGAAGCCTTGGCTGCTAGGCTGTCTTTGTTCAATCCCTCTTTGTCGCAGCTTCAGAATTTTCTTGAGCAAAAGCCACCAAGGCTTTCCCCTGGCATTGAAGAGTTAGTCCAGAAGTTAAAGGCTAATGGCATAGTTGTTTATCTGATCTCTGGTGGCTTCCGTCAAATGATCAATCCTGTTGCATCAATACTTGGGATTCCACAAGAGAATATTTTTGCCAATCAACTACTTTTTGGAAGCTCTGGAGAGTTTCTGGGGTTTGACGAAAACGAGCCTACTTCAAGGAGTGGAGGAAAATCTGTTGCTGTCCAACAAATCAAGAAGGCTCGTGGTTTCAAAACTTTAACCATGGTGGGAGATGGTGCAACTGATTTTGAGGCTCGTAGACCAGGTGGTGCTGACATGTTTGTTTGCTATGCTGGTGTTCAACTTCGAGAATCTGTTGCTGCAAAAGCTGATTGGCTAGTTTTCAATTTCAATGACCTCATAAATTCATTGGGGTAA 813 0.4453 MEGLASSGINTVRVFGIPKHQSRFLPSSTLHLRNSSVCGIGIDNKKKKQWVLELWRNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQNFLEQKPPRLSPGIEELVQKLKANGIVVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGEFLGFDENEPTSRSGGKSVAVQQIKKARGFKTLTMVGDGATDFEARRPGGADMFVCYAGVQLRESVAAKADWLVFNFNDLINSLG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1123 270 TIGRFAM serB: phosphoserine phosphatase SerB 54 253 IPR004469 GO:0006564|GO:0036424
Aed10g1123 270 Gene3D Phosphoserine phosphatase; domain 2 71 121 - -
Aed10g1123 270 PANTHER BNAA06G12800D PROTEIN 50 269 - -
Aed10g1123 270 SUPERFAMILY HAD-like 51 269 IPR036412 -
Aed10g1123 270 Pfam haloacid dehalogenase-like hydrolase 59 232 - -
Aed10g1123 270 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 60 231 - -
Aed10g1123 270 CDD HAD_PSP_eu 59 262 - -
Aed10g1123 270 Gene3D - 122 269 IPR023214 -
Aed10g1123 270 PANTHER PHOSPHOSERINE PHOSPHATASE 50 269 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1123 K01079 - gmx:100814193 493.426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1123 10 10357855 10361489 Aed10g1123 10 10357855 10361489 ECH