Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1121 ATGATGCATCCAGTGGATACCGTTAAAACTCGACTACAAAGTCAAGCTATTCTTAATAGAATTCAGAACCAGAAAAACATATTGCAGATGGTGCGACATGTGTGGCAGGTTGATGGATTAAAAGGCTTTTACAGGGGTGTAACACCTGGTATTACTGGATCTCTTGCAACTGGTGCAACATATTTTGGTGTCATAGAGTCCACAAAAAAGTGGATTGAGGTGTCACATCCTAGCCTTAGGGGCCACTGGGCACATTTTATTGCTGGAGCTGTTGGGCCAGAACGGAATACTCAGAGCAGTGACACTCTAGGTTCTTTTGTGTATGTTCCATGTGAAGTGATGAAGCTACGCATGCAGGTTCAAGGCACAAATACATCTTGGAATTCTGTTGCTGTGAAGGATGGCATCGCAATCAAGCCTAGCACACAAATATATGGTTATTATACAGGGATGTTCCATGCAGGCAGCTCGATATGGAAAACACAGGGCTTAAAGGGTTTATATGCAGGATATTTGTCTACATTGGCAAGGGATGTTCCATTTGCTGGACTAATGGTCGTGTTCTATGAAGCTTTGAAAGATGCTACGGAATATGTAGAGCAAAGATGGATAACTAGCCCGAATTGGCATGTGAATAATTCATTTGAGGGCCTGGTTTCAGGAGGATTAGCTGGTGGTCTCAGTGCATATCTCACCACTCCTTTAGATGTTGTTAAAACAAGACTGCAAGTGCAGGGTTCAACTTCGAGGTATAATGGTTGGTTGGATGCGATTCGCAATATATGGGCTGGAGAAGGCATGAAGGGGATGTTTAGGGGTAGCATCCCCAGGATTACATGGTACATTCCAGCTTCAGCGCTTACGTTCATGGCTGTGGAATTTCTCAGAGATCATTTTTATGAACGAGTGCCCCATAATAATTTGCAAGATGTTGGTAGATTATCAGTAGACAAAAAATCTCTGCAGGTTTAA 972 0.429 MMHPVDTVKTRLQSQAILNRIQNQKNILQMVRHVWQVDGLKGFYRGVTPGITGSLATGATYFGVIESTKKWIEVSHPSLRGHWAHFIAGAVGPERNTQSSDTLGSFVYVPCEVMKLRMQVQGTNTSWNSVAVKDGIAIKPSTQIYGYYTGMFHAGSSIWKTQGLKGLYAGYLSTLARDVPFAGLMVVFYEALKDATEYVEQRWITSPNWHVNNSFEGLVSGGLAGGLSAYLTTPLDVVKTRLQVQGSTSRYNGWLDAIRNIWAGEGMKGMFRGSIPRITWYIPASALTFMAVEFLRDHFYERVPHNNLQDVGRLSVDKKSLQV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1121 323 SUPERFAMILY Mitochondrial carrier 2 295 IPR023395 -
Aed10g1121 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 195 IPR018108 -
Aed10g1121 323 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 320 - -
Aed10g1121 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 71 IPR018108 -
Aed10g1121 323 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 320 - -
Aed10g1121 323 Pfam Mitochondrial carrier protein 1 72 IPR018108 -
Aed10g1121 323 Pfam Mitochondrial carrier protein 100 195 IPR018108 -
Aed10g1121 323 Pfam Mitochondrial carrier protein 214 301 IPR018108 -
Aed10g1121 323 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 298 IPR018108 -
Aed10g1121 323 Gene3D Mitochondrial carrier domain 96 313 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1121 Aed-Chr10 10341521 10346621 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1121 219 312 EF-hand Containing Proteins AT2G35800 31.959 7.53e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1121 - - gmx:100790921 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1121 10 10341521 10346621 Aed10g1121 10 10341521 10346621 ECH