Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1120 TTTTCACTCTTTCCTGGAACAGTGAGTGAGTATCGAACCGTCACAAATGCAGCCACCCAAAGAAGATCACAACAAGTAGATATTTATATTTGTTTATGTGTTTGTTATTCCTTGCAGGCTGAAGTTTGTGATATATGTGGTGCTCGTGGATTTTATGAAACAATTATTACTTGTTCTAAATGCAACGTGAACTGTGAACATGCTTACTGCATGCAATTTAATACCTTAATAATTCCTATAAACTGGACTTGTGAGCCTTGCAAATCCAAGGATGTTTCGACTTCACCACAGAAAGTGAATCAAAGTATTGGCTTGAGGGCTTCTAAAATGCCATGGCTTGTCAAAACAGGGAAAGTGAAGTTTCTTCCTGAGGATGAAGTCATTAAACTTTCTTCTAGTAATTTTCCCACAGCAATGACCCGGAAGACTTCTTTTGGAACAAAAAATGTTGTTTCAAAGATTCCCTCGGTGACTCCAAAAACATATCCTTGCATATCACCTCCTAAAGTAGTTGGGAAGCTTCCAACAAATGATGAAATGCACAAGAAGTCAGTGACTAATCAATATGCTTCTTGCTCATTATCAAAAGGACCACCAAAGGAGTGTATAGGAGAAAATCAGTTACCCTTCAGTGGAGTGATACCTGCCAAAAAAGTTCGAAGCCATGATGCTCAGAATGAAAATCCTACAAAAGACACACCCTTTGAAGCTTTATCAACAGGAAAATCTTTCCCAATTCTTGGTTCAAGTGGTATCCTTTGTGCTGATGCTGAATGTAACAAATCTAATATTGAAAAAAGTGGCCTTCAGAGTGTTCATGAAAGCTTAAACCTTTATTCTAAATTTTTACCCTCTGCAGTTCCTGCTTGGAGGGGTCAATTCCAAATTCTTCAAACTGCTGCATCTAGTGAATTCTATGATGTGCTTGAGGCCCAACCACCATGCATTGTTAACAAGAAAGCATATAATTTTTCAAGAGAAATGCCACCAATCCTTCAACTGGAGTCACTTCCTGTGTTGAACGCTTTGACTGACATATTCCGGGACAATTCTCCTAAGCTTCAGGATATCGCATTGTATTTCTTTCCATCAGAACATACTGAGAGGTCTAGACAGAACCTGAATAGCATATTGAAGTTTATGAGTGCTGAGAAATCAATGCTGAGAAGCTCTATTAATGGAGTAGAGTTGCTGGTATTTACCTCAGATCAACTTGACCTGGACTCGCACGGTGCTCTAGCTGCAGTAAACGCTGGAAATTTCCTCTGGGGAATGTTTCACAAAAAGAAAATTGATCAAGCTGTTGAAAGAGTACCTGACAACATGGAGCCGGTTGATATGGACATTGATATGATCGGAGGAAAGGACATGGTGGGGAGAGTTGATCGTAGATATAAACGCAAGAGTGACTCTTTGATGGATGAGTGTTATAACAAACTGGACGTTCCTCCAGGGTTTGAAAAATTTAAGTGA 1473 0.3931 FSLFPGTVSEYRTVTNAATQRRSQQVDIYICLCVCYSLQAEVCDICGARGFYETIITCSKCNVNCEHAYCMQFNTLIIPINWTCEPCKSKDVSTSPQKVNQSIGLRASKMPWLVKTGKVKFLPEDEVIKLSSSNFPTAMTRKTSFGTKNVVSKIPSVTPKTYPCISPPKVVGKLPTNDEMHKKSVTNQYASCSLSKGPPKECIGENQLPFSGVIPAKKVRSHDAQNENPTKDTPFEALSTGKSFPILGSSGILCADAECNKSNIEKSGLQSVHESLNLYSKFLPSAVPAWRGQFQILQTAASSEFYDVLEAQPPCIVNKKAYNFSREMPPILQLESLPVLNALTDIFRDNSPKLQDIALYFFPSEHTERSRQNLNSILKFMSAEKSMLRSSINGVELLVFTSDQLDLDSHGALAAVNAGNFLWGMFHKKKIDQAVERVPDNMEPVDMDIDMIGGKDMVGRVDRRYKRKSDSLMDECYNKLDVPPGFEKFK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1120 490 PANTHER - 39 463 - -
Aed10g1120 490 SUPERFAMILY FYVE/PHD zinc finger 40 93 IPR011011 -
Aed10g1120 490 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 109 IPR013083 -
Aed10g1120 490 PANTHER ZINC ION-BINDING PROTEIN 39 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1120 Aed-Chr10 10329625 10334377 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1120 - - ccaj:109815968 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1120 10 10329625 10334377 Aed10g1120 10 10329625 10334377 ECH