LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed10g1063	AGTCCATGCAACAGTAGAAAAGAAGACAACCATGAGACAAGAAGAAGAGTACCACTAACAAGCAACCTAAAGCACTCCGAACAAGTTTGTAACCTTAGACAATCACCACTCACTCCCAATTCTATCACCATGTCTAGGGTTTCAGCGAATCCTTCTTCTCCCTCACGCTCCATGGCTTCCACCGCCAAAGCCTACGCGCTCCCAATCGTTCTCTTCGCCGGAGCCATGTTCTACCAGCTCTTCCTTATTCCCAATGCCTTCCCTCCTTCTCATTACGACCTTCTGCAAATTGAGAGCTATAGCTCGGTCGAGAATGTGAAGGAGGCTTACGACAAGTTTCAATCCAAATGGAATTCTGCCATGGAAGATTTTGATATTCATAAGTTTTTAAAGATTCGATATGCTTATGAGTTGCTGACAAATCCTTTATGGAAAAGAGACTATGACATATTTGGTGTTGATGAACAACTCCATATTGTTGAGAGTGCCAGCAAGCGTTATGCAGGGAAACATATTTCAGAATTGGAGTTCCCTTTACTGCAGGCCCCTTCTGATTTGATTGATCTTTCTTTTAAAGAGTTTTTGTATTCATCAGGGAGTGAACGTTGTGCTCAATTTTCCAAGTCATGGAATAAAATTGCTTCTTTATTGGATGTTTTTGCAAACATTGGTATGGTGGAACTTGGTGAGAAGGAGCTCTCCATGTACTTTGCTGATAGAAGATCTACAGGAAAACCATTTTTTAGAAATGCTGAGAAGATTTTTAAAAGAGGAATTGGGAATTTGGGAGGAATTCCATCTCTTGTTGCCATTCCCGCAGGATGTCGATCTTCTAAATGTTTTAGTAGGTTTGATGGTGAGCTTACTGTTGACAAGGTTACAAATTGGTTTGCGACAACTGTACTGGCTTTACCTCAAGTTAACTACTACTCTAGGGAATCACTGGCAGAGATCAGCTATGTAAAGATTTGCAACAATGTACAACATGGATGGAGAAGTGATAACCGATTACCTAAAAAGAATGTGCCAAATTTTCTTGGTAAAACTAGCCTACATAAGGTAAAAGTCATATTTTTCTCAAATTCTGGTGAACGTGCTGCTCCATTTATACGACAAGCAGCTAAAGACTATTGGGCTTATGCTTCGTTTGCATTCATTCTCTGGCGGGAGGAGGAATCTTCTTATTGGTGGGGAGCATTTGGGGTGGAATCTGCACCTGCTATTGTATTTCTTAAAGACCCAGGTGTCAAACCTGTTGTTCATCATGGTTCAGTCAACAATTCATTGTTTTTGAATTTGATGGAAAATAATAAACAGCAAGAGCTTCCTCAACTAAGGAGTGTAACATCAATGGAGCTAGGCTGTGATCCTCATGGCTATTCTCGTGCTGGTTATGATACAGTTATATGGTATTGTGTTATTGCAGTAGGAAGGCCAAGCCTGGAGTTGAACAAAATGCGTGAAACTATGTGCAGGGTCCAAGAAACATTGTCTAAGCATAGCCAGGTGGATGCATCATCTGTAAATCAATCCTTAGTGCCAGCTGTGGATGCATTTAAGAGAAGGCGGTTGACATTTGCTTGGCTTGATGGTGAAAAGCAAAAGGATTACTGCCAATTTTACCTTGGTCAAGCGGCTAGTGATCACACTTGTGGGCAACGACGAGGTGTGAACGATATTCCTCGGTTATTTGTTATTCGTTACCTGAGGAATAGTAGTGCTGTTGATTTGAGAGCAGAAGAAAAGACGAAGTGGAATTCATTACTGGTCCAAGATCTAATCAATGATTCTGACCAGACAGGTCAGTTTGTAGCTGGGTACAAGGGAGAAGATGATGTCTCACAGATAACCGACTGGCTTGCAAATATTATTTCTGATGGTGACTCCAGAGACTTGCCATTCTTTACACTACGGACTCCTAAGCTCGTTCCCGATGACACAGAACCTATTTGGTCCATGGCTGCACAAAGTATTCCTTTGAACAATCTGAAGCAGAGTGTTCTTGGTCGTCTTAGTGGACTCTCTGTATACCGTGAGGATCCAAGAGTTGGTCCGTTCTTGCTTCTAGGTGCATTAATTTCTTTGGGTACTATCTGGCTGCGAAGGAGCCAACAAATGCCTTCTGAGGATGAAAGAAAACAGAAACTGAGAGAGCGGGTCCGGAGTCGGTCAAATAAGAAAGCACCCCCTTCTATGACAGATTTTGCGCCATCAAATGCTTTCCAGATGCCACTATCAGATTCTGAATCTGAGTAG	2256	0.4202	SPCNSRKEDNHETRRRVPLTSNLKHSEQVCNLRQSPLTPNSITMSRVSANPSSPSRSMASTAKAYALPIVLFAGAMFYQLFLIPNAFPPSHYDLLQIESYSSVENVKEAYDKFQSKWNSAMEDFDIHKFLKIRYAYELLTNPLWKRDYDIFGVDEQLHIVESASKRYAGKHISELEFPLLQAPSDLIDLSFKEFLYSSGSERCAQFSKSWNKIASLLDVFANIGMVELGEKELSMYFADRRSTGKPFFRNAEKIFKRGIGNLGGIPSLVAIPAGCRSSKCFSRFDGELTVDKVTNWFATTVLALPQVNYYSRESLAEISYVKICNNVQHGWRSDNRLPKKNVPNFLGKTSLHKVKVIFFSNSGERAAPFIRQAAKDYWAYASFAFILWREEESSYWWGAFGVESAPAIVFLKDPGVKPVVHHGSVNNSLFLNLMENNKQQELPQLRSVTSMELGCDPHGYSRAGYDTVIWYCVIAVGRPSLELNKMRETMCRVQETLSKHSQVDASSVNQSLVPAVDAFKRRRLTFAWLDGEKQKDYCQFYLGQAASDHTCGQRRGVNDIPRLFVIRYLRNSSAVDLRAEEKTKWNSLLVQDLINDSDQTGQFVAGYKGEDDVSQITDWLANIISDGDSRDLPFFTLRTPKLVPDDTEPIWSMAAQSIPLNNLKQSVLGRLSGLSVYREDPRVGPFLLLGALISLGTIWLRRSQQMPSEDERKQKLRERVRSRSNKKAPPSMTDFAPSNAFQMPLSDSESE	751

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed10g1063	751	PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	71	316	-	-
	Aed10g1063	751	PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	340	750	-	-
	Aed10g1063	751	MobiDBLite	consensus disorder prediction	726	751	-	-
	Aed10g1063	751	Gene3D	DnaJ domain	88	168	IPR036869	-
	Aed10g1063	751	MobiDBLite	consensus disorder prediction	1	25	-	-
	Aed10g1063	751	MobiDBLite	consensus disorder prediction	35	54	-	-
	Aed10g1063	751	ProSiteProfiles	dnaJ domain profile.	90	152	IPR001623	-
	Aed10g1063	751	MobiDBLite	consensus disorder prediction	1	21	-	-
	Aed10g1063	751	PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	71	316	-	-
	Aed10g1063	751	PANTHER	DNAJ HOMOLOG SUBFAMILY C MEMBER 16	340	750	-	-
	Aed10g1063	751	SUPERFAMILY	Chaperone J-domain	81	152	IPR036869	-
	Aed10g1063	751	MobiDBLite	consensus disorder prediction	704	751	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed10g1063	-		-	gmx:100820244	1179.08

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aed10g1063	10	9515529	9528947	Aed10g1063	10	9515529	9528947	ECH