Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1053 ATGAAGTTTCTCCATGTGGTGCTAGTTGTTATAATAGGCACCGTATTTGGAATAGGGCTTGAAGGGTGCGAATGCAAGGTTGTGCAGTTCATTTTTGGAGACTCACTCTCTGATGTTGGAAACAACAAGTACCTCTCTAAGAGCCTTGCTCAGGCAAGTTTACCTTGGTATGGTATTGATTTGGGAAATGGTCTTCCTAATGGCAGATTCTCCAATGGTCGAACTGTTGCTGATATAATAGGTGACAATATGGGGCTTCCTAGGTCTCCAGCATTCCTTGACCCATCTTTATCTGAAGATGTTATATTGGAAAGTGGGGTGAATTATGCTTCTGGGGGTGGAGGCATCTTGAATGAAACTGGAAGTTATTTTGCACTGCATGGCCTAGGAGTAAGGCAGTTGATGGTGTTTGGGCTGGGCCCAATGGGCTGCATTCCACTTCAAAGGGTGCTTAGTACATCTGGGGATTGTCAAGATAGAACAAACAAATTGGCTATTAGCTTCAATAAAGCTTCTAGCAAGTTAATTGATGACTTGGGAAAGCAACTACCCAATTCAACCTACAGATTTGGAGATGCATATGACGTTGTTAATGATGTGATTAGCAACCCAAACAAATATGGATTCCAAAATTCAGACTCACCATGTTGCTCCTTTGGGAATATTCGACCAGCTCTTACATGCATACCAGCATCAAAACTGTGCAAAGATAGAAGCAAGTACGTTTTTTGGGATGAGTACCATCCCTCAGACAGAGCCAATGAACTAATTGCCAATGAACTCATCAAGAAATTTGGGTTTGTGCGTGTTGATCAAACAAAACCTCCTTCACCATCACCAGCTCTTGCTCCATCTTCTGATGATTAA 867 0.4221 MKFLHVVLVVIIGTVFGIGLEGCECKVVQFIFGDSLSDVGNNKYLSKSLAQASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRSPAFLDPSLSEDVILESGVNYASGGGGILNETGSYFALHGLGVRQLMVFGLGPMGCIPLQRVLSTSGDCQDRTNKLAISFNKASSKLIDDLGKQLPNSTYRFGDAYDVVNDVISNPNKYGFQNSDSPCCSFGNIRPALTCIPASKLCKDRSKYVFWDEYHPSDRANELIANELIKKFGFVRVDQTKPPSPSPALAPSSDD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1053 288 Gene3D SGNH hydrolase 28 126 IPR036514 -
Aed10g1053 288 Gene3D SGNH hydrolase 127 265 IPR036514 -
Aed10g1053 288 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 5 125 - -
Aed10g1053 288 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 5 125 - -
Aed10g1053 288 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 126 278 - -
Aed10g1053 288 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 126 278 - -
Aed10g1053 288 Pfam GDSL-like Lipase/Acylhydrolase 30 118 IPR001087 GO:0016788
Aed10g1053 288 Pfam GDSL-like Lipase/Acylhydrolase 126 260 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1053 Aed-Chr10 9344661 9346892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1053 125 261 Acyl Lipid Metabolism Gene Families AT4G10950 29.496 4.24e-24 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1053 - - gmx:100803991 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1053 10 9344661 9346892 Aed10g1053 10 9344661 9346892 ECH