Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1050 ATGGGGGAGCACGTGGTTTTATCTGTTGTTGACCCTCTTCTTATAGCACCTGCAACTTTGCTACCACAACATGATGGTGATGCTCGAGCTTCACTCATTGAGGGTGCTACTACTCATGTCAATGATGTTGAGGAATGTGATACACTTGAAGATGAAAAAGTAAAGGAAAAAGAAAAAGAAGAAGAAGACCTTATCCAATTGGTGGAATGTCGCATTTGCCAAGAGGATGATACCCTTCAAAATTTGGACATACCCTGTGCTTGCAATGGAACATTGAAGTTTGCTCATGCGAAATGTATTCAACTATGGTGCTACGAGAAGGGTGATACAATCTGTGAGATCTGCCATCAGCCATTCAAACCTGGTTACACTGCACCATCACCTGTCTGCCATCCTGGGGATACTTCAATTGATATCAGTGATGACTGGGCAACCTCTAGTAATCCTTTAGATTTGCACAATGCTCGACTTTTGGCTATTGCAGCTATCGAGCACCAAGTTCCGGAGACTGAGCATGAAGATTATGTCAATGCTGGAACTGGTGGAACTACATTGTGGCACGCTCTTGGTCTAATTTTAATGGCTCTTTTACTTCTGAGGCATGCTGCTCCCCTCTTCAATGCGGATGTGGAGAAAGCTTTAGCATATTTTAATTTTTTCTTTCTTCGTGTGGCTGCTGTTATCCTTCCTTGCTATCTTATGGCCTGGATAATCCGCATAATACTGCATCAAAGGCAAAGACAACAAGCAACTGAAGAACTTGCATTTATGCTACAAGCAGAGGAACAGCAAGGTTAG 798 0.4286 MGEHVVLSVVDPLLIAPATLLPQHDGDARASLIEGATTHVNDVEECDTLEDEKVKEKEKEEEDLIQLVECRICQEDDTLQNLDIPCACNGTLKFAHAKCIQLWCYEKGDTICEICHQPFKPGYTAPSPVCHPGDTSIDISDDWATSSNPLDLHNARLLAIAAIEHQVPETEHEDYVNAGTGGTTLWHALGLILMALLLLRHAAPLFNADVEKALAYFNFFFLRVAAVILPCYLMAWIIRIILHQRQRQQATEELAFMLQAEEQQG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1050 265 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 258 IPR033275 -
Aed10g1050 265 Pfam RING-variant domain 70 115 IPR011016 GO:0008270
Aed10g1050 265 ProSiteProfiles Zinc finger RING-CH-type profile. 62 122 IPR011016 GO:0008270
Aed10g1050 265 PANTHER OS11G0600700 PROTEIN 1 258 - -
Aed10g1050 265 SUPERFAMILY RING/U-box 68 120 - -
Aed10g1050 265 SMART ringv_2 69 116 IPR011016 GO:0008270
Aed10g1050 265 Pfam Protein of unknown function (DUF3675) 121 238 IPR022143 -
Aed10g1050 265 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 126 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1050 Aed-Chr10 9330167 9335144 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1050 - - gsj:114409718 391.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1050 10 9330167 9335144 Aed10g1050 10 9330167 9335144 ECH