Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1040 ATGGTGGCTGACAGGAGCAAGAAGCCGAAGGTCACCGAAAAGGCCGAGAACCTCGACGAAATCGACGGAGAACTCGTCCTCTCCATCGAGAAGTTGCAGGAGATCCAAGACGAGCTCGAAAAGGTGTGCCAATTCTCTTCAATTTTCCTCTTCCTTTTGTTCGCTTCTCAATTTCGCGGAATTCGGATCGTCGGAGGTTTTTATGCGACGTTGTTTGAAATTGTGACTTTGCTTTTGGAGCCTGCCATTTGCACGCGCGTTCAATGTGTTGGATTGTCTCTGTTTCTGTTTTTAAGTCATCCTGCTCTTGGTGATCTTTTGAACGAGGAAGATCAGAAGATATTTAAGCATTTGAGTTCTCTTGAGGTTGAAGATTTTAAAGATGTCAAATCAGGCTACTCAATTACCTTTAATTTCAATGCCAATCCCTATTTTGAGGATACAAAACTTGTAAAGACTTATACTTTCCTTGAGGAAGGTACAACTAAGGTTACTGCTACACCCATAAAATGGAAAGAGGGCAAGGGCATACCCAATGGAGTTAATCATGAGAAAAAAGGGAACAAGCGTGCCCCTACTGATGTCAGCTTCTTTAGTTGGTTTAGTGACACTGAGCATAAAGATGATATAGATGACATTCATGATGAGGTTGCAGAATTAATCAAGGATGATTTATGGCCAAATCCACTTACTTATTTCAACAATGTAAGTTAA 714 0.4118 MVADRSKKPKVTEKAENLDEIDGELVLSIEKLQEIQDELEKVCQFSSIFLFLLFASQFRGIRIVGGFYATLFEIVTLLLEPAICTRVQCVGLSLFLFLSHPALGDLLNEEDQKIFKHLSSLEVEDFKDVKSGYSITFNFNANPYFEDTKLVKTYTFLEEGTTKVTATPIKWKEGKGIPNGVNHEKKGNKRAPTDVSFFSWFSDTEHKDDIDDIHDEVAELIKDDLWPNPLTYFNNVS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1040 237 Pfam Nucleosome assembly protein (NAP) 97 234 IPR002164 GO:0005634|GO:0006334
Aed10g1040 237 Gene3D - 1 47 - -
Aed10g1040 237 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 94 235 - -
Aed10g1040 237 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 44 - -
Aed10g1040 237 Gene3D Nucleosome assembly protein 93 237 - -
Aed10g1040 237 SUPERFAMILY NAP-like 96 234 IPR037231 -
Aed10g1040 237 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 94 235 IPR002164 GO:0005634|GO:0006334
Aed10g1040 237 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 44 IPR002164 GO:0005634|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1040 Aed-Chr10 9195764 9198266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1040 K11290 - gmx:100808081 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed10g1040 10 9195764 9198266 Aed6g1568 6 19757294 19760951 ECH
Aed10g1040 10 9195764 9198266 Aed10g1040 10 9195764 9198266 ECH
Aed10g1040 10 9195764 9198266 Aed6g1568 6 19757294 19760951 PCT