Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1033 ATGGCGTCGAGTATAGGGATGATGGATAGCGCTTACTTTGTCGGCAGAAACGAGATTCTCACTTGGATCAACAATGGCCTTCAGCTTAACCTTTCTCGCATTGAGGAGGCTGCATCTGGTGCTGTACAATGCCAGATGATGGACATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGATGCAAGGAGTGAGTATGATATGATCCAGAACTACAAAGTTCTACAGGATGTGTTCAACAAGCTGAAAATTGAAAAGCATATTGAAGTTGGCAGGCTTGTTAAAGGACGGCCTTTGGACAACTTGGAGTTCCTTCAATGGCTGAAACGTTATTGTGATTCTGTCAATGGTGGCATTATGAATGAGAACTACAATCCTGTGGAGCGTAGGTTTAAGGGAGGAAAGGGGAATGTCAAGAGTCTAAGGACCGCAAAATCACTGCAAACAAATACTATGAATCATCCTGGTTCAGGCGACTCACTCAGTACGAACAGAACCTTTGGGTCCAAGCAATTGAGGTCAAGTGGAGTAGCAGACGGGGCTAATGGTTCAGCAGAGGTTCAGGCTTTGTCCAAGCAGGTTTCTGATCTCAAACTCTCAGTAGATCACTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAGGATTCAGAGGTGGAGAATGATCCTATGTCTCTAGCAATTAAGAAGATTTTGTATGCTGCTGATGAAAAAGAATCAGCATTAGATGAAGCTCAGGAGTACCTTCATGAAGCCATCAATGCTGATGAAGATGAAGAAGAAGAAGAAGCAGAAGCCGAAGGAGAAACAAAAGCAGAAGTAGAAACTGAAGCCTCTTACAAATAG 876 0.4258 MASSIGMMDSAYFVGRNEILTWINNGLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDARSEYDMIQNYKVLQDVFNKLKIEKHIEVGRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRFKGGKGNVKSLRTAKSLQTNTMNHPGSGDSLSTNRTFGSKQLRSSGVADGANGSAEVQALSKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQDSEVENDPMSLAIKKILYAADEKESALDEAQEYLHEAINADEDEEEEEAEAEGETKAEVETEASYK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1033 291 Gene3D - 6 134 IPR036872 -
Aed10g1033 291 MobiDBLite consensus disorder prediction 265 291 - -
Aed10g1033 291 Coils Coil 245 287 - -
Aed10g1033 291 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 181 251 IPR004953 GO:0008017
Aed10g1033 291 SUPERFAMILY EB1 dimerisation domain-like 188 248 IPR036133 GO:0008017
Aed10g1033 291 Pfam EB1-like C-terminal motif 206 244 IPR004953 GO:0008017
Aed10g1033 291 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Aed10g1033 291 MobiDBLite consensus disorder prediction 265 280 - -
Aed10g1033 291 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 272 IPR027328 GO:0008017
Aed10g1033 291 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Aed10g1033 291 Gene3D - 181 251 - -
Aed10g1033 291 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B 1 272 - -
Aed10g1033 291 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Aed10g1033 291 Coils Coil 189 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1033 Aed-Chr10 9117391 9122547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1033 K10436 - gmx:100809691 462.996