Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed10g1028 ATGACAGATGCTTCAAAAAATGGTGTTGCTCAAGAGACGGTACAAAATACTTTCCGCAGAGCTAGCCAAGGGATGACACAGCAAGAGGCTCGGCAGGTTCTTGGTGTTACTGAGAAAACTCCTTGGGAGGAGATTGTGAAGCCATCACCACCACCGTCTCCTCCATCAAACAAACACCACCCCTCTCTGGGTTCCACAGTGGAACTCTGCATCGGCGACTTCAACTGGTCCCAGTTCCTCCAATCCGTCATTGTTTCCTTCGCCTGGGCCTTCGACGGCCAGCAGACCTTCATCTCCGTCTTCACCGACGCCCTGCCCGAGTGGCACTGTACCACTGAGCATGGCACCAGCGGAGGCAATGCATGCAAGGCTGCAGATGATATCTGCAGCCTTGCGAAAAGCTCATGGGCGTGGGACGGGCCCACGCAGGTCTCCATCGTGTCGGAGTGGGGCCTGGAGTGTGCGAACCCGCTGACCGCCGGACTGCCCGCATCGATGTTCTTTGCGGGGTGCCTGGTTGGCGGGTTCCTGCTGGCCTCACTCGCGGACTCGTCCCTCGGCCGCAAGAACATGCTGTTCTTCTCGTGCCTCGTGATGGCCCTCACCTCCTTTCTCATCACTCTGTCGCCCAACGTTTGGATCTACTCGGCGCTCAAGTTTGTTTGCGGCTTCGCCCGCGCCACCATCGGGACTTCCGCGCTTGTCCTCGCCTCGGAGCTCGTTGGGAAACGGTGGCGTGGCAAGATCGGTGGCGTTGGGTTTTTTTGTTTTACTATAGTAGGGTTCCTGTCCCTGCCAGCCATGGCTTACATAAACAAAAGCTCTTCATGGAGGAACCTCTATCTCTGGACTTCAGTTTCAACAATGTTCTACTGCGTGTTGATGAAGCTTTTCGTCACCGAGTCTCCAAGGTGGCTTCTCGTGCGAGGAAGAACAGAAGAAGCCGTTGCAACGCTAGCGTGCATCACGTCAGTCACACAGAGCAACCTCGAGCTGGCCATCGAAAACATGGCCCACAAGGAAGAGACTTGGAACGTGGACATCTTCTCAGCCCTAAAGATCCTGATGCAGAAAAAATGGTCTTCTAGAAGATTAGCATCGATCATGGCAATGGGAATCGGAATCGGATTGGTGTACTACGGTATGCCGTTAGGGCTTCAGAACCTCTCCTTCAACCTATATTTAGCCGTCACGTTCAACGCATTGTCGGAATTACCCTCGGCGTTGATCGTGTTCTTCTTCATAGATAAGTTCAACAGAAGAATCGCGCTGCTTCTGTTCACAATCCTAAGCGGTGTGTTCAGTGTGATTTCGATTCTGGAAGTGAAGGCGTGGAGTAGAGCCATGAACGACGTTGTACAGATTGTGTTTGAGTTGGTGTCGTTCTTCAGCGCGTGTTCTTCGTTCAATGTTTATCTGATCTACACGACGGAGCTGTTCCCGACGTGCGTGAGGAACTCGGCGCTGTCGATGGCGAGGCTCTCGGTGGTGCTCGGCGGCGCGTTCAGCCCCTTGCTGGTGAGCGTCGGGAGGGGGAACAAGTTTCTGTGCTATGGGGTTTTCGGGCTGGTGATAGGGTTTAGCGGGATCTTTGGAATATTCTTGCCGGAGACAAAAGGGAGAGCGCTGTGTGACACAATGGATGAGGAAGAAAACAAGGAAAAATTAATGTTGGCTTGA 1680 0.5351 MTDASKNGVAQETVQNTFRRASQGMTQQEARQVLGVTEKTPWEEIVKPSPPPSPPSNKHHPSLGSTVELCIGDFNWSQFLQSVIVSFAWAFDGQQTFISVFTDALPEWHCTTEHGTSGGNACKAADDICSLAKSSWAWDGPTQVSIVSEWGLECANPLTAGLPASMFFAGCLVGGFLLASLADSSLGRKNMLFFSCLVMALTSFLITLSPNVWIYSALKFVCGFARATIGTSALVLASELVGKRWRGKIGGVGFFCFTIVGFLSLPAMAYINKSSSWRNLYLWTSVSTMFYCVLMKLFVTESPRWLLVRGRTEEAVATLACITSVTQSNLELAIENMAHKEETWNVDIFSALKILMQKKWSSRRLASIMAMGIGIGLVYYGMPLGLQNLSFNLYLAVTFNALSELPSALIVFFFIDKFNRRIALLLFTILSGVFSVISILEVKAWSRAMNDVVQIVFELVSFFSACSSFNVYLIYTTELFPTCVRNSALSMARLSVVLGGAFSPLLVSVGRGNKFLCYGVFGLVIGFSGIFGIFLPETKGRALCDTMDEEENKEKLMLA 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed10g1028 559 SUPERFAMILY MFS general substrate transporter 140 545 IPR036259 -
Aed10g1028 559 Gene3D MFS general substrate transporter like domains 73 552 IPR036259 -
Aed10g1028 559 Pfam Sugar (and other) transporter 159 543 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed10g1028 559 ProSiteProfiles Major facilitator superfamily (MFS) profile. 81 540 IPR020846 GO:0022857
Aed10g1028 559 MobiDBLite consensus disorder prediction 1 34 - -
Aed10g1028 559 MobiDBLite consensus disorder prediction 1 61 - -
Aed10g1028 559 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 3 57 555 - -
Aed10g1028 559 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 57 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed10g1028 Aed-Chr10 9058014 9076328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed10g1028 50 553 Organic Solute Cotransporters AT1G16390 56.667 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed10g1028 - - gmx:100812722 873.618